RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W DBF20P32328 564 aa3.15□□□□□ -1.91
PRE1YER012W SPC110P32380 944 aa3.15□□□□□ -1.91
PRE1YER012W VPS17P32913 551 aa3.15□□□□□ -1.91
PRE1YER012W CNS1P33313 385 aa3.15□□□□□ -1.91
PRE1YER012W ALY1P36117 915 aa3.15□□□□□ -1.91
PRE1YER012W TSC10P38342 320 aa3.15□□□□□ -1.91
PRE1YER012W DBP8P38719 431 aa3.15□□□□□ -1.91
PRE1YER012W NDT80P38830 627 aa3.15□□□□□ -1.91
PRE1YER012W RIC1P40395 1056 aa3.15□□□□□ -1.91
PRE1YER012W YGR021WP53212 290 aa3.15□□□□□ -1.91
PRE1YER012W SMM1P53720 384 aaKnown RBP3.15□□□□□ -1.91
PRE1YER012W WSC2P53832 503 aa3.15□□□□□ -1.91
PRE1YER012W SUE1Q06524 206 aa3.15□□□□□ -1.91
PRE1YER012W KEL3Q08979 651 aaPredicted RBP3.15□□□□□ -1.91
PRE1YER012W NUS1Q12063 375 aa3.15□□□□□ -1.91
PRE1YER012W CFT2Q12102 859 aaPredicted RBP3.15□□□□□ -1.91
PRE1YER012W RRI2Q12348 645 aa3.15□□□□□ -1.91
PRE1YER012W MOT1P32333 1867 aa3.15□□□□□ -1.91
PRE1YER012W ARG81P05085 880 aa3.14□□□□□ -1.91
PRE1YER012W PUT2P07275 575 aa3.14□□□□□ -1.91
PRE1YER012W RPL20AP0CX23 172 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W RPL20BP0CX24 172 aaPredicted RBP3.14□□□□□ -1.91
PRE1YER012W COQ1P18900 473 aa3.14□□□□□ -1.91
PRE1YER012W CMK1P27466 446 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W CHS3P29465 1165 aa3.14□□□□□ -1.91
PRE1YER012W PAH1P32567 862 aa3.14□□□□□ -1.91
PRE1YER012W PRS1P32895 427 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W YNK1P36010 153 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W TIF5P38431 405 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W ELO1P39540 310 aa3.14□□□□□ -1.91
PRE1YER012W UIP3P39547 235 aa3.14□□□□□ -1.91
PRE1YER012W MKT1P40850 830 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W YGL242CP53066 181 aa3.14□□□□□ -1.91
PRE1YER012W YGL039WP53183 348 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W YMR160WQ03823 816 aa3.14□□□□□ -1.91
PRE1YER012W ERP1Q05359 219 aaKnown RBP3.14□□□□□ -1.91
PRE1YER012W TEN1Q07921 160 aa3.14□□□□□ -1.91
PRE1YER012W SNF1P06782 633 aaKnown RBP3.13□□□□□ -1.91
PRE1YER012W CDC60P26637 1090 aaKnown RBP3.13□□□□□ -1.91
PRE1YER012W MRP20P32387 263 aa3.13□□□□□ -1.91
PRE1YER012W SHP1P34223 423 aa3.13□□□□□ -1.91
PRE1YER012W LAG1P38703 411 aa3.13□□□□□ -1.91
PRE1YER012W UME6P39001 836 aa3.13□□□□□ -1.91
PRE1YER012W FMP10P40098 244 aa3.13□□□□□ -1.91
PRE1YER012W PIL1P53252 339 aaKnown RBP3.13□□□□□ -1.91
PRE1YER012W YML037CQ03703 340 aa3.13□□□□□ -1.91
PRE1YER012W VMS1Q04311 632 aaKnown RBP3.13□□□□□ -1.91
PRE1YER012W SKG3Q06315 1026 aa3.13□□□□□ -1.91
PRE1YER012W MYO1P08964 1928 aa3.13□□□□□ -1.91
PRE1YER012W RPP0P05317 312 aaKnown RBP3.12□□□□□ -1.91
PRE1YER012W SAM1P10659 382 aaKnown RBP3.12□□□□□ -1.91
PRE1YER012W UTR4P32626 227 aa3.12□□□□□ -1.91
PRE1YER012W MRS6P32864 603 aaKnown RBP3.12□□□□□ -1.91
PRE1YER012W SWE1P32944 819 aa3.12□□□□□ -1.91
PRE1YER012W DIA4P38705 446 aaPredicted RBP3.12□□□□□ -1.91
PRE1YER012W YTA12P40341 825 aa3.12□□□□□ -1.91
PRE1YER012W YJL132WP47014 750 aa3.12□□□□□ -1.91
PRE1YER012W SGM1P47166 707 aa3.12□□□□□ -1.91
PRE1YER012W BUD32P53323 261 aa3.12□□□□□ -1.91
PRE1YER012W DUG3P53871 357 aa3.12□□□□□ -1.91
PRE1YER012W INN1P53901 409 aa3.12□□□□□ -1.91
PRE1YER012W MUB1Q03162 620 aa3.12□□□□□ -1.91
PRE1YER012W YCL021W-AQ96VH3 125 aa3.12□□□□□ -1.91
PRE1YER012W RPB2P08518 1224 aaKnown RBP3.11□□□□□ -1.91
PRE1YER012W PRE8P23639 250 aa3.11□□□□□ -1.91
PRE1YER012W UIP5P36137 443 aa3.11□□□□□ -1.91
PRE1YER012W CST26P38226 397 aa3.11□□□□□ -1.91
PRE1YER012W VID27P40157 782 aa3.11□□□□□ -1.91
PRE1YER012W SLZ1P40167 298 aa3.11□□□□□ -1.91
PRE1YER012W DIA3P52290 468 aa3.11□□□□□ -1.91
PRE1YER012W YMR321CQ04898 105 aa3.11□□□□□ -1.91
PRE1YER012W GLO2Q05584 274 aa3.11□□□□□ -1.91
PRE1YER012W APE1P14904 514 aa3.1□□□□□ -1.91
PRE1YER012W PWP1P21304 576 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W DBP7P36120 742 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W OSH3P38713 996 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W CSM2P40465 213 aa3.1□□□□□ -1.91
PRE1YER012W LYS14P40971 790 aa3.1□□□□□ -1.91
PRE1YER012W IDP2P41939 412 aa3.1□□□□□ -1.91
PRE1YER012W ERG26P53199 349 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W RHO4Q00246 291 aa3.1□□□□□ -1.91
PRE1YER012W SVL3Q03088 825 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W VID22Q05934 901 aa3.1□□□□□ -1.91
PRE1YER012W PGA3Q12746 312 aaKnown RBP3.1□□□□□ -1.91
PRE1YER012W TUS1Q06412 1307 aa3.1□□□□□ -1.91
PRE1YER012W XRS2P33301 854 aa3.09□□□□□ -1.91
PRE1YER012W PTH2P34222 208 aa3.09□□□□□ -1.91
PRE1YER012W MTR2P34232 184 aaKnown RBP3.09□□□□□ -1.91
PRE1YER012W SAP185P40856 1058 aa3.09□□□□□ -1.91
PRE1YER012W RBG2P53295 368 aaKnown RBP3.09□□□□□ -1.91
PRE1YER012W INA17Q02888 182 aa3.09□□□□□ -1.91
PRE1YER012W SLD5Q03406 294 aa3.09□□□□□ -1.91
PRE1YER012W DPB4Q04603 196 aaKnown RBP3.09□□□□□ -1.91
PRE1YER012W PSR1Q07800 427 aa3.09□□□□□ -1.91
PRE1YER012W ERP3Q12403 225 aa3.09□□□□□ -1.91
PRE1YER012W YDR524C-BQ3E6R4 66 aa3.09□□□□□ -1.91
PRE1YER012W PDR18P53756 1333 aa3.09□□□□□ -1.91
PRE1YER012W FKS1P38631 1876 aaKnown RBP3.09□□□□□ -1.92
PRE1YER012W VMA2P16140 517 aaKnown RBP3.08□□□□□ -1.92
PRE1YER012W KGD1P20967 1014 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms