RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C NTO1Q12311 748 aa3.02□□□□□ -1.93
VPS3YDR495C MED4Q12343 284 aa3.02□□□□□ -1.93
VPS3YDR495C LAM4P38800 1345 aa3.02□□□□□ -1.93
VPS3YDR495C ERG11P10614 530 aa3.01□□□□□ -1.93
VPS3YDR495C PUP3P25451 205 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C PRO3P32263 286 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C ARO4P32449 370 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C EMP70P32802 667 aa3.01□□□□□ -1.93
VPS3YDR495C ASC1P38011 319 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C DIA4P38705 446 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C PGA2P53903 129 aa3.01□□□□□ -1.93
VPS3YDR495C ADE16P54113 591 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C ERV41Q04651 352 aa3.01□□□□□ -1.93
VPS3YDR495C RRN11Q04712 507 aa3.01□□□□□ -1.93
VPS3YDR495C MED2Q12124 431 aa3.01□□□□□ -1.93
VPS3YDR495C AAC1P04710 309 aa3.01□□□□□ -1.93
VPS3YDR495C PUT2P07275 575 aa3.01□□□□□ -1.93
VPS3YDR495C YPK1P12688 680 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C PMI40P29952 429 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C MSS1P32559 526 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C RAD23P32628 398 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C ELF1P36053 145 aa3.01□□□□□ -1.93
VPS3YDR495C SPP381P38282 291 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C SAF1P38352 637 aa3.01□□□□□ -1.93
VPS3YDR495C YHB1P39676 399 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C YFR020WP43600 232 aa3.01□□□□□ -1.93
VPS3YDR495C BNA6P43619 295 aa3.01□□□□□ -1.93
VPS3YDR495C FAR3P46671 204 aa3.01□□□□□ -1.93
VPS3YDR495C MPS3P47069 682 aa3.01□□□□□ -1.93
VPS3YDR495C VPS73P53142 486 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C SPC98P53540 846 aa3.01□□□□□ -1.93
VPS3YDR495C MFM1Q02783 413 aa3.01□□□□□ -1.93
VPS3YDR495C YMR187CQ03236 431 aa3.01□□□□□ -1.93
VPS3YDR495C SSY1Q03770 852 aa3.01□□□□□ -1.93
VPS3YDR495C NRT1Q08485 598 aa3.01□□□□□ -1.93
VPS3YDR495C LEA1Q08963 238 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C FMP16Q12497 93 aa3.01□□□□□ -1.93
VPS3YDR495C CDC21P06785 304 aa3.01□□□□□ -1.93
VPS3YDR495C RNR2P09938 399 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C ALG1P16661 449 aa3.01□□□□□ -1.93
VPS3YDR495C OSM1P21375 501 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C GAR1P28007 205 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C RAD14P28519 371 aa3.01□□□□□ -1.93
VPS3YDR495C YKR015CP36111 568 aa3.01□□□□□ -1.93
VPS3YDR495C ELO1P39540 310 aa3.01□□□□□ -1.93
VPS3YDR495C YER085CP40058 173 aa3.01□□□□□ -1.93
VPS3YDR495C DPB11P47027 764 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C BRO1P48582 844 aa3.01□□□□□ -1.93
VPS3YDR495C ASN2P49090 572 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C KTR5P53966 522 aaPredicted RBP3.01□□□□□ -1.93
VPS3YDR495C STD1Q02794 444 aa3.01□□□□□ -1.93
VPS3YDR495C UBP16Q02863 499 aa3.01□□□□□ -1.93
VPS3YDR495C PLB2Q03674 706 aa3.01□□□□□ -1.93
VPS3YDR495C ROT1Q03691 256 aa3.01□□□□□ -1.93
VPS3YDR495C YML053CQ04978 212 aa3.01□□□□□ -1.93
VPS3YDR495C MRI1Q06489 411 aaKnown RBP3.01□□□□□ -1.93
VPS3YDR495C MRPL35Q06678 367 aa3.01□□□□□ -1.93
VPS3YDR495C INP53Q12271 1107 aa3.01□□□□□ -1.93
VPS3YDR495C RRD2Q12461 358 aa3.01□□□□□ -1.93
VPS3YDR495C IRC20Q06554 1556 aa3□□□□□ -1.93
VPS3YDR495C SPS4P09937 338 aa3□□□□□ -1.93
VPS3YDR495C YMR085WP0CF18 432 aa3□□□□□ -1.93
VPS3YDR495C KSS1P14681 368 aa3□□□□□ -1.93
VPS3YDR495C SRP54P20424 541 aaKnown RBP3□□□□□ -1.93
VPS3YDR495C ECM25P32525 599 aa3□□□□□ -1.93
VPS3YDR495C SOF1P33750 489 aaKnown RBP3□□□□□ -1.93
VPS3YDR495C PCA1P38360 1216 aa3□□□□□ -1.93
VPS3YDR495C LOC1P43586 204 aaPredicted RBP3□□□□□ -1.93
VPS3YDR495C MSY1P48527 492 aa3□□□□□ -1.93
VPS3YDR495C TOM22P49334 152 aa3□□□□□ -1.93
VPS3YDR495C BIO3P50277 480 aa3□□□□□ -1.93
VPS3YDR495C VOA1P53262 265 aa3□□□□□ -1.93
VPS3YDR495C MRPS17Q03246 237 aaPredicted RBP3□□□□□ -1.93
VPS3YDR495C GTO3Q04806 366 aa3□□□□□ -1.93
VPS3YDR495C RXT3Q07458 294 aa3□□□□□ -1.93
VPS3YDR495C TEN1Q07921 160 aa3□□□□□ -1.93
VPS3YDR495C IZH3Q07959 543 aa3□□□□□ -1.93
VPS3YDR495C BSC6Q08280 497 aa3□□□□□ -1.93
VPS3YDR495C SLK19Q08581 821 aaKnown RBP3□□□□□ -1.93
VPS3YDR495C BTS1Q12051 335 aa3□□□□□ -1.93
VPS3YDR495C RTC1Q08281 1341 aa3□□□□□ -1.93
VPS3YDR495C GAC1P28006 793 aa3□□□□□ -1.93
VPS3YDR495C ICL1P28240 557 aaPredicted RBP3□□□□□ -1.93
VPS3YDR495C STV1P37296 890 aa3□□□□□ -1.93
VPS3YDR495C TAE1P38340 232 aa3□□□□□ -1.93
VPS3YDR495C ALP1P38971 573 aa3□□□□□ -1.93
VPS3YDR495C YMR147WP40218 223 aaKnown RBP3□□□□□ -1.93
VPS3YDR495C OPT1P40897 799 aa3□□□□□ -1.93
VPS3YDR495C EFM5P53200 248 aaKnown RBP3□□□□□ -1.93
VPS3YDR495C YGR127WP53275 312 aa3□□□□□ -1.93
VPS3YDR495C RRG8Q06109 277 aa3□□□□□ -1.93
VPS3YDR495C RTT109Q07794 436 aa3□□□□□ -1.93
VPS3YDR495C HMI1Q12039 706 aa3□□□□□ -1.93
VPS3YDR495C ATG9Q12142 997 aa3□□□□□ -1.93
VPS3YDR495C CDC5P32562 705 aa2.99□□□□□ -1.93
VPS3YDR495C SRB4P32569 687 aa2.99□□□□□ -1.93
VPS3YDR495C PAD1P33751 242 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
VPS3YDR495C LHS1P36016 881 aa2.99□□□□□ -1.93
VPS3YDR495C NUP133P36161 1157 aa2.99□□□□□ -1.93
VPS3YDR495C AAP1P37898 856 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms