RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W PDS5Q04264 1277 aa2.23□□□□□ -2.05
VPS52YDR484W RTP1Q12751 981 aa2.23□□□□□ -2.05
VPS52YDR484W ARG3P05150 338 aa2.23□□□□□ -2.05
VPS52YDR484W GDH1P07262 454 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W RPL31BP0C2H9 113 aaKnown RBP2.23□□□□□ -2.05
VPS52YDR484W ATR1P13090 542 aa2.23□□□□□ -2.05
VPS52YDR484W SWE1P32944 819 aa2.23□□□□□ -2.05
VPS52YDR484W LOS1P33418 1100 aaPredicted RBP2.23□□□□□ -2.05
VPS52YDR484W CMC1P36064 111 aa2.23□□□□□ -2.05
VPS52YDR484W CBP4P37267 147 aa2.23□□□□□ -2.05
VPS52YDR484W SHO1P40073 367 aa2.23□□□□□ -2.05
VPS52YDR484W ALG8P40351 577 aa2.23□□□□□ -2.05
VPS52YDR484W RPR2P40571 144 aa2.23□□□□□ -2.05
VPS52YDR484W YJL132WP47014 750 aa2.23□□□□□ -2.05
VPS52YDR484W COS10P52924 374 aa2.23□□□□□ -2.05
VPS52YDR484W RIM20Q12033 661 aa2.23□□□□□ -2.05
VPS52YDR484W ATG29Q12092 213 aa2.23□□□□□ -2.05
VPS52YDR484W AYT1Q12226 474 aa2.23□□□□□ -2.05
VPS52YDR484W MCK1P21965 375 aaKnown RBP2.22□□□□□ -2.05
VPS52YDR484W CPR3P25719 182 aa2.22□□□□□ -2.05
VPS52YDR484W MFT1P33441 392 aaKnown RBP2.22□□□□□ -2.05
VPS52YDR484W POP1P41812 875 aa2.22□□□□□ -2.05
VPS52YDR484W IRC6P43615 237 aa2.22□□□□□ -2.05
VPS52YDR484W IMP4P53941 290 aaKnown RBP2.22□□□□□ -2.05
VPS52YDR484W SCW10Q04951 389 aa2.22□□□□□ -2.05
VPS52YDR484W COG4Q06096 861 aa2.22□□□□□ -2.05
VPS52YDR484W MRD1Q06106 887 aaKnown RBP2.22□□□□□ -2.05
VPS52YDR484W CFT2Q12102 859 aaPredicted RBP2.22□□□□□ -2.05
VPS52YDR484W MES1P00958 751 aaKnown RBP2.21□□□□□ -2.06
VPS52YDR484W ATS1P31386 333 aa2.21□□□□□ -2.06
VPS52YDR484W SEC66P33754 206 aa2.21□□□□□ -2.06
VPS52YDR484W RSM22P36056 628 aa2.21□□□□□ -2.06
VPS52YDR484W PMU1P36069 295 aa2.21□□□□□ -2.06
VPS52YDR484W TUL1P36096 758 aa2.21□□□□□ -2.06
VPS52YDR484W OTU2P38747 307 aaKnown RBP2.21□□□□□ -2.06
VPS52YDR484W MET18P40469 1032 aa2.21□□□□□ -2.06
VPS52YDR484W HXT14P42833 540 aa2.21□□□□□ -2.06
VPS52YDR484W YML133CQ03099 1374 aa2.21□□□□□ -2.06
VPS52YDR484W YLL067CQ07888 1374 aa2.21□□□□□ -2.06
VPS52YDR484W YLL066CQ99208 1374 aa2.21□□□□□ -2.06
VPS52YDR484W CKA1P15790 372 aa2.21□□□□□ -2.06
VPS52YDR484W PRP16P15938 1071 aaPredicted RBP2.21□□□□□ -2.06
VPS52YDR484W HAT2P39984 401 aa2.21□□□□□ -2.06
VPS52YDR484W NDE1P40215 560 aa2.21□□□□□ -2.06
VPS52YDR484W ESL1P40456 1118 aa2.21□□□□□ -2.06
VPS52YDR484W GWT1P47026 490 aa2.21□□□□□ -2.06
VPS52YDR484W OCA1P50946 238 aaPredicted RBP2.21□□□□□ -2.06
VPS52YDR484W JJJ1P53863 590 aa2.21□□□□□ -2.06
VPS52YDR484W MRPL19P53875 158 aa2.21□□□□□ -2.06
VPS52YDR484W SLG1P54867 378 aa2.21□□□□□ -2.06
VPS52YDR484W RQC1Q05468 723 aaKnown RBP2.21□□□□□ -2.06
VPS52YDR484W KEL3Q08979 651 aaPredicted RBP2.21□□□□□ -2.06
VPS52YDR484W LEU4P06208 619 aaKnown RBP2.2□□□□□ -2.06
VPS52YDR484W RHO2P06781 192 aa2.2□□□□□ -2.06
VPS52YDR484W LPD1P09624 499 aaKnown RBP2.2□□□□□ -2.06
VPS52YDR484W PUT3P25502 979 aaPredicted RBP2.2□□□□□ -2.06
VPS52YDR484W YCR022CP25620 114 aa2.2□□□□□ -2.06
VPS52YDR484W PMT1P33775 817 aa2.2□□□□□ -2.06
VPS52YDR484W YHR218WP38899 603 aa2.2□□□□□ -2.06
VPS52YDR484W KRE9P39005 276 aa2.2□□□□□ -2.06
VPS52YDR484W FAU1P40099 211 aa2.2□□□□□ -2.06
VPS52YDR484W IDP2P41939 412 aa2.2□□□□□ -2.06
VPS52YDR484W GIR2Q03768 265 aaPredicted RBP2.2□□□□□ -2.06
VPS52YDR484W SOV1Q04748 898 aa2.2□□□□□ -2.06
VPS52YDR484W INH1P01097 85 aa2.19□□□□□ -2.06
VPS52YDR484W HEM2P05373 342 aa2.19□□□□□ -2.06
VPS52YDR484W BUB3P26449 341 aa2.19□□□□□ -2.06
VPS52YDR484W FUN19P28003 413 aaPredicted RBP2.19□□□□□ -2.06
VPS52YDR484W RAD14P28519 371 aa2.19□□□□□ -2.06
VPS52YDR484W GPI10P30777 616 aa2.19□□□□□ -2.06
VPS52YDR484W CRM1P30822 1084 aaKnown RBP2.19□□□□□ -2.06
VPS52YDR484W AGA1P32323 725 aa2.19□□□□□ -2.06
VPS52YDR484W ATP11P32453 318 aa2.19□□□□□ -2.06
VPS52YDR484W GYP6P32806 458 aa2.19□□□□□ -2.06
VPS52YDR484W REC114P32841 428 aa2.19□□□□□ -2.06
VPS52YDR484W DED81P38707 554 aaKnown RBP2.19□□□□□ -2.06
VPS52YDR484W SYG1P40528 902 aa2.19□□□□□ -2.06
VPS52YDR484W YGL108CP53139 140 aa2.19□□□□□ -2.06
VPS52YDR484W OGG1P53397 376 aaPredicted RBP2.19□□□□□ -2.06
VPS52YDR484W MET17P06106 444 aa2.19□□□□□ -2.06
VPS52YDR484W CBS2P14905 389 aa2.19□□□□□ -2.06
VPS52YDR484W AFG1P32317 509 aa2.19□□□□□ -2.06
VPS52YDR484W FRE2P36033 711 aa2.19□□□□□ -2.06
VPS52YDR484W SMF1P38925 575 aa2.19□□□□□ -2.06
VPS52YDR484W YGR149WP48236 432 aa2.19□□□□□ -2.06
VPS52YDR484W RMD9P53140 646 aaKnown RBP2.19□□□□□ -2.06
VPS52YDR484W TAP42Q04372 366 aa2.19□□□□□ -2.06
VPS52YDR484W GRX6Q12438 231 aa2.19□□□□□ -2.06
VPS52YDR484W CTF3Q12748 733 aa2.19□□□□□ -2.06
VPS52YDR484W CDC31P06704 161 aaKnown RBP2.18□□□□□ -2.06
VPS52YDR484W SPS4P09937 338 aa2.18□□□□□ -2.06
VPS52YDR484W ROX1P25042 368 aa2.18□□□□□ -2.06
VPS52YDR484W SPB1P25582 841 aaPredicted RBP2.18□□□□□ -2.06
VPS52YDR484W NDI1P32340 513 aa2.18□□□□□ -2.06
VPS52YDR484W SRB7P47822 140 aa2.18□□□□□ -2.06
VPS52YDR484W MSO1P53604 210 aaKnown RBP2.18□□□□□ -2.06
VPS52YDR484W CAF40P53829 373 aa2.18□□□□□ -2.06
VPS52YDR484W NCS2P53923 493 aaPredicted RBP2.18□□□□□ -2.06
VPS52YDR484W MDM1Q01846 1127 aa2.18□□□□□ -2.06
VPS52YDR484W VTA1Q06263 330 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms