RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	SRB7	P47822	140 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	GCV1	P48015	400 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	PML39	Q03760	334 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	MGR3	Q04472	501 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	RNH1	Q04740	348 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	YLR352W	Q06479	807 aa		4.09	□□□□□ -1.76
BRE4	YDL231C	GRR1	P24814	1151 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	ATP7	P30902	174 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	SPS19	P32573	292 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	MAC1	P35192	417 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	RPF2	P36160	344 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	CTP1	P38152	299 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	MTW1	P39731	289 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	ECM10	P39987	644 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	RTT105	P40063	208 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	AAT1	Q01802	451 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	MET14	Q02196	202 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	OPI10	Q08202	246 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	PER33	Q12144	273 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	YBL029C-A	Q3E756	94 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	UBR2	Q07963	1872 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	POL2	P21951	2222 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	SPB1	P25582	841 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	PPZ1	P26570	692 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	RPS5	P26783	225 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	YJU2	P28320	278 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	CRM1	P30822	1084 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	LYP1	P32487	611 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	CSE1	P33307	960 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	ARN1	P38731	627 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
BRE4	YDL231C	YEL073C	P39974	107 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	RIO2	P40160	425 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	PTR3	P43606	678 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	STB2	P46679	850 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	MIG2	P53035	382 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	IDP3	P53982	420 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	PRP38	Q00723	242 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	DCI1	Q08558	271 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	GPN2	Q08726	347 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	NSL1	Q12143	216 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	AHA1	Q12449	350 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	NOT5	Q12514	560 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	BRR1	Q99177	341 aa	Predicted RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	RPP1B	P10622	106 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	APN1	P22936	367 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	RPL5	P26321	297 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	GMH1	P36125	273 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	EXO84	P38261	753 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	GND1	P38720	489 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	GIC1	P38785	314 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	YHR078W	P38799	552 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	GPP1	P41277	250 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	GLG2	P47011	380 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	EFR3	Q03653	782 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	APC4	Q04601	652 aa		4.08	□□□□□ -1.76
BRE4	YDL231C	CMR1	Q12510	522 aa	Known RBP	4.08	□□□□□ -1.76
BRE4	YDL231C	CET1	O13297	549 aa	Predicted RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	INH1	P01097	85 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	HXK2	P04807	486 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	BET2	P20133	325 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	PHO87	P25360	923 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	AGP1	P25376	633 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	YJU3	P28321	313 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	EHT1	P38295	451 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	MET30	P39014	640 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	GDI1	P39958	451 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
BRE4	YDL231C	PRM1	P53835	661 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SNZ1	Q03148	297 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	TDA5	Q06417	326 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	IRC10	Q08118	586 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	GPB1	Q08886	897 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	HAL9	Q12180	1030 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	YLL054C	Q12244	843 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	PDH1	Q12428	516 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	MSS18	P08593	268 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	RPS4A	P0CX35	261 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	RPS4B	P0CX36	261 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	PRI2	P20457	528 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	KIN3	P22209	435 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SIS1	P25294	352 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	TRX3	P25372	127 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	ARP2	P32381	391 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	CDC12	P32468	407 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	ARC19	P33204	171 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	MDJ1	P35191	511 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	DED81	P38707	554 aa	Known RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	IMA5	P40884	581 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SHE4	P51534	789 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SHY1	P53266	389 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	YNR061C	P53747	219 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SGO1	Q08490	590 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SMF3	Q12078	473 aa	Predicted RBP	4.07	□□□□□ -1.76
BRE4	YDL231C	LCB4	Q12246	624 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	SKS1	Q12505	502 aa		4.07	□□□□□ -1.76
BRE4	YDL231C	PHO5	P00635	467 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	NUP2	P32499	720 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	SSO1	P32867	290 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms