RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PTCH2Q9Y6C5 1203 aa22.93■■□□□ 1.26
SHKBP1-222ENST00000600320 RPTORQ8N122 1335 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 XRCC5P13010 732 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 EIF2AK2P19525 551 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 KRT2P35908 639 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 PRMT2P55345 433 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 UBXN2AP68543 259 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 NR5A1Q13285 461 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 CTU1Q7Z7A3 348 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 TEX2Q8IWB9 1127 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 DIS3L2Q8IYB7 885 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 IL31RAQ8NI17 732 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 BICD2Q8TD16 824 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 TNFRSF25Q93038 417 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 RMDN3Q96TC7 470 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 ANO3Q9BYT9 981 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 PXMP2Q9NR77 195 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 PTPN22Q9Y2R2 807 aa22.92■■□□□ 1.26
SHKBP1-222ENST00000600320 FRMPD4Q14CM0 1322 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 IGHA2P01877 340 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 SYT1P21579 422 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 AP3B2Q13367 1082 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 EARS2Q5JPH6 523 aaKnown RBP22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 ZNF467Q7Z7K2 595 aaPredicted RBP22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 DNERQ8NFT8 737 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 RAET1EQ8TD07 263 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 TRIB2Q92519 343 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 SLC5A4Q9NY91 659 aa22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 ADD3Q9UEY8 706 aaKnown RBP22.91■■□□□ 1.26
SHKBP1-222ENST00000600320 SPDYE3A6NKU9 549 aa22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 KIF28PB7ZC32 967 aa22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 ELNP15502 786 aa22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 ARHGEF16Q5VV41 709 aa22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 NSUN6Q8TEA1 469 aaKnown RBP22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 PDCD2LQ9BRP1 358 aa22.9■■□□□ 1.26
SHKBP1-222ENST00000600320 FAM205CA6NFA0 338 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 H3BQV1 296 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 ADCY3O60266 1144 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 FOSP01100 380 aaPredicted RBP22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 EDNRBP24530 442 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 PGM5Q15124 567 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 OLFML2BQ68BL8 750 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 MORC4Q8TE76 937 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 ZFP91Q96JP5 570 aaPredicted RBP22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 MCM3APO60318 1980 aa22.89■■□□□ 1.25
SHKBP1-222ENST00000600320 LRRC37A2A6NM11 1700 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 EDIL3O43854 480 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 CAPN15O75808 1086 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 PDCP20941 246 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 TRIM32Q13049 653 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 SAFBQ15424 915 aaKnown RBP eCLIP22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 MAMDC4Q6UXC1 1216 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 ARMCX2Q7L311 632 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 TINF2Q9BSI4 451 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 BRMS1Q9HCU9 246 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 MTMR6Q9Y217 621 aa22.88■■□□□ 1.25
SHKBP1-222ENST00000600320 VPS37CA5D8V6 355 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 SNAI1O95863 264 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 NR3C2P08235 984 aa22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 CYP2C19P33261 490 aa22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 SREBF1P36956 1147 aa22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 CRYGNQ8WXF5 182 aa22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-222ENST00000600320 ASB14A6NK59 587 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 MYCLP12524 364 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 MCTP2Q6DN12 878 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 PIK3AP1Q6ZUJ8 805 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 KRT25Q7Z3Z0 450 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 PXYLP1Q8TE99 480 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 IWS1Q96ST2 819 aa22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 FOXP1Q9H334 677 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-222ENST00000600320 LOC102724159A0A0B4J2E5 919 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 CCDC194A0A1B0GVG4 234 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 STX6O43752 255 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 MRPS9P82933 396 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 ARHGAP4P98171 946 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 PKP1Q13835 747 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 NONOQ15233 471 aaKnown RBP eCLIP22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 PWP2Q15269 919 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 INF2Q27J81 1249 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 PRAMEF19Q5SWL8 479 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 MCTP1Q6DN14 999 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 VSIG10LQ86VR7 867 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 MSL3Q8N5Y2 521 aaKnown RBP22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 TBCKQ8TEA7 893 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 KATNBL1Q9H079 304 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 EHMT1Q9H9B1 1298 aa22.85■■□□□ 1.25
SHKBP1-222ENST00000600320 SYNGAP1Q96PV0 1343 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 MYH7BA7E2Y1 1941 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 U2AF2P26368 475 aaKnown RBP eCLIP22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 GRK4P32298 578 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 PDE4DQ08499 809 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 PCNX4Q63HM2 1172 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 FBXO46Q6PJ61 603 aaPredicted RBP22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 EEPD1Q7L9B9 569 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 TRMT44Q8IYL2 757 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 SLAIN1Q8ND83 568 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 SH3TC2Q8TF17 1288 aa22.84■■□□□ 1.25
SHKBP1-222ENST00000600320 HMGCRP04035 888 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms