RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CAPN11Q9UMQ6 739 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 MYH7BA7E2Y1 1941 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 SIPA1L1O43166 1804 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 PRKCSHP14314 528 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 TCP10Q12799 353 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 MCM6Q14566 821 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 TMEM119Q4V9L6 283 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 ARHGAP29Q52LW3 1261 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 SUPT20HQ8NEM7 779 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 CARD6Q9BX69 1037 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 DNAJC18Q9H819 358 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 LZTFL1Q9NQ48 299 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 FAM198AQ9UFP1 575 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 MRFAP1Q9Y605 127 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 MYMKA6NI61 221 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 FANCGO15287 622 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 MTIF2P46199 727 aaKnown RBP21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 USP11P51784 963 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 MSL1Q68DK7 614 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 NT5C3AQ9H0P0 336 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 ARGLU1Q9NWB6 273 aaPredicted RBP21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 MYO1AQ9UBC5 1043 aa21.4■■□□□ 1.02
PRKCSH-209ENST00000589838 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 TADA3O75528 432 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 FCER1AP12319 257 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 ERVK-24P63145 666 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 QRICH1Q2TAL8 776 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 CENPPQ6IPU0 288 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 UBE2Q2Q8WVN8 375 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 CNOT6LQ96LI5 555 aaKnown RBP21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 DNAJC7Q99615 494 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 DDX41Q9UJV9 622 aaKnown RBP21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 PCDHA1Q9Y5I3 950 aa21.39■■□□□ 1.02
PRKCSH-209ENST00000589838 SLX4Q8IY92 1834 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 TTC26A0AVF1 554 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 POTEMA6NI47 508 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 ENTPD3O75355 529 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 TBC1D8BQ0IIM8 1120 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 FBXO38Q6PIJ6 1188 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 FOXR2Q6PJQ5 311 aa21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 GUF1Q8N442 669 aaKnown RBP21.39■■□□□ 1.01
PRKCSH-209ENST00000589838 RAD21O60216 631 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 H2AFXP16104 143 aaPredicted RBP21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 ICA1Q05084 483 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 AP3B2Q13367 1082 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 FKBP15Q5T1M5 1219 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 MOXD1Q6UVY6 613 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 KIAA0895Q8NCT3 520 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 GMCL1P1Q8NEA9 526 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 SLC39A2Q9NP94 309 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 BMP2KQ9NSY1 1161 aaPredicted RBP21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 ZNHIT6Q9NWK9 470 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 SCN9AQ15858 1988 aa21.38■■□□□ 1.01
PRKCSH-209ENST00000589838 ZNF646O15015 1829 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 B4DLN1 442 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 RNF225M0QZC1 329 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 CACNB3P54284 484 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 CBX1P83916 185 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 PPP2R3AQ06190 1150 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 CDC37Q16543 378 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 HYIQ5T013 277 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 HAS1Q92839 578 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 NOC4LQ9BVI4 516 aaKnown RBP21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 EPN1Q9Y6I3 576 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 ABCB11O95342 1321 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 CYP3A7-CYP3A51PA0A087WV96 503 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 CYP3A7P24462 503 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 LRRC63Q05C16 580 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 LRRN4CLQ8ND94 238 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 GMCL1Q96IK5 515 aa21.37■■□□□ 1.01
PRKCSH-209ENST00000589838 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 COL2A1P02458 1487 aaPredicted RBP21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 TUBB4BP68371 445 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 FIGNQ5HY92 759 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 ZNF569Q5MCW4 686 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 SH3BP5LQ7L8J4 393 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 DYMQ7RTS9 669 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 SMAP1Q8IYB5 467 aaPredicted RBP21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 SLFN12Q8IYM2 578 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 ERGIC2Q96RQ1 377 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 TSG101Q99816 390 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 AMNQ9BXJ7 453 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 SYNPO2Q9UMS6 1093 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 ATRNL1Q5VV63 1379 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 RGPD3A6NKT7 1758 aaPredicted RBP21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 RGPD4Q7Z3J3 1758 aa21.36■■□□□ 1.01
PRKCSH-209ENST00000589838 CTAGE9A4FU28 777 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 SPDYE4A6NLX3 237 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 NDUFA10O95299 355 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 TRIM21P19474 475 aaKnown RBP21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 RBM26Q5T8P6 1007 aaKnown RBP21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 ACRBPQ8NEB7 543 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 DDX12PQ92771 950 aa21.35■■□□□ 1.01
PRKCSH-209ENST00000589838 ANO3Q9BYT9 981 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms