RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 ADAMTS5Q9UNA0 930 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
COPS3-215ENST00000578317 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
COPS3-215ENST00000578317 hCG_1984214I3L0E3 225 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 ZBTB5O15062 677 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 CETPP11597 493 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SKIP12755 728 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SCG2P13521 617 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SYT1P21579 422 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SLC16A2P36021 539 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 NUCB2P80303 420 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 TRAF1Q13077 416 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 LARP1BQ659C4 914 aaKnown RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 ZNF713Q8N859 430 aaPredicted RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 FBXO18Q8NFZ0 1043 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 DDX11Q96FC9 970 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 RPAP3Q9H6T3 665 aaPredicted RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 PPP1R9AQ9ULJ8 1098 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 PRR12Q9ULL5 1215 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 PCNTO95613 3336 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 XBP1P17861 261 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 ZNF157P51786 506 aaPredicted RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.934e-7■■■□□ 17.3
COPS3-215ENST00000578317 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 LBX2Q6XYB7 198 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
COPS3-215ENST00000578317 PIGSQ96S52 555 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 RANBP17Q9H2T7 1088 aaKnown RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 SLC38A10Q9HBR0 1119 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 VAT1LQ9HCJ6 419 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 ZCCHC17Q9NP64 241 aaKnown RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 SEC63Q9UGP8 760 aaKnown RBP9.23□□□□□ -0.93
COPS3-215ENST00000578317 AGTPBP1Q9UPW5 1226 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 IVNS1ABPQ9Y6Y0 642 aa9.23□□□□□ -0.93
COPS3-215ENST00000578317 MANSC4A6NHS7 340 aaPredicted RBP9.22□□□□□ -0.93
COPS3-215ENST00000578317 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 STX6O43752 255 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 FLOT1O75955 427 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 OAZ1P54368 228 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 PTK2Q05397 1052 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 DGKZQ13574 1117 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 GALNT17Q6IS24 598 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 RASAL3Q86YV0 1011 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 ALG1Q9BT22 464 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 CPVLQ9H3G5 476 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 FBXO28Q9NVF7 368 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 CHMP5Q9NZZ3 219 aa9.22□□□□□ -0.93
COPS3-215ENST00000578317 ESYT2A0FGR8 921 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 RASSF10A6NK89 507 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 FAM155AB1AL88 458 aaPredicted RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 VWA5AO00534 786 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 PPFIA3O75145 1194 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 MCCD1P59942 119 aaPredicted RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 IKQ13123 557 aaPredicted RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 TREML2Q5T2D2 321 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 ANKRD23Q86SG2 305 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 MB21D1Q8N884 522 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 CCDC12Q8WUD4 166 aaPredicted RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 BRI3BPQ8WY22 251 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 KIFC2Q96AC6 838 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 C8orf76Q96K31 380 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 AMNQ9BXJ7 453 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 MAF1Q9H063 256 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.93
COPS3-215ENST00000578317 WDR33Q9C0J8 1336 aaKnown RBP9.21□□□□□ -0.93
COPS3-215ENST00000578317 hCG_1642624A0A1W2PR95 340 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 PPP1R11O60927 126 aaPredicted RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 DTNBO60941 627 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZBED4O75132 1171 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 CALML3P27482 149 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 TRIM29Q14134 588 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 QRICH1Q2TAL8 776 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 HOMER1Q86YM7 354 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 REPS2Q8NFH8 660 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 P2RX7Q99572 595 aaKnown RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 PHF20Q9BVI0 1012 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZMYND12Q9H0C1 365 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ASCC2Q9H1I8 757 aaPredicted RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 ISY1Q9ULR0 285 aaKnown RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 ABT1Q9ULW3 272 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms