RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ASMTLO95671 621 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 C8AP07357 584 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 RNASE1P07998 156 aaKnown RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 PNLIPP16233 465 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 CPEP16870 476 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 NR1I3Q14994 352 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 FAM209AQ5JX71 171 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 UBE2R2Q712K3 238 aaPredicted RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 KIAA0907Q7Z7F0 614 aaPredicted RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 MTDHQ86UE4 582 aaKnown RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 SLCO6A1Q86UG4 719 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 ANKLE2Q86XL3 938 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 LZTR1Q8N653 840 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 NETO2Q8NC67 525 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 ABHD4Q8TB40 342 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 ZCRB1Q8TBF4 217 aaKnown RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 C1orf159Q96HA4 380 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 TMEM169Q96HH4 297 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 KIRREL1Q96J84 757 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 HHIPL1Q96JK4 782 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 EXOC2Q96KP1 924 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 G6PC3Q9BUM1 346 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 PHF20Q9BVI0 1012 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 GPRC5CQ9NQ84 441 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 CLEC1BQ9P126 229 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 ACSL6Q9UKU0 697 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 CTNND2Q9UQB3 1225 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.63□□□□□ -1.83
COPS3-213ENST00000577210 CARMIL2Q6F5E8 1435 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 C7orf72A4D263 438 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 HRKO00198 91 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 TBX1O43435 398 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 ZBTB7AO95365 584 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 ASLP04424 464 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 MPOP05164 745 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 GRIA2P42262 883 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 CYP4F8P98187 520 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 GUCY1A3Q02108 690 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 SPIRE1Q08AE8 756 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 PAK1Q13153 545 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 SQSTM1Q13501 440 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 HSF5Q4G112 596 aaPredicted RBP3.62□□□□□ -1.83
COPS3-213ENST00000577210 RALGPS1Q5JS13 557 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 EGFLAMQ63HQ2 1017 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 CYP4F22Q6NT55 531 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 LBX2Q6XYB7 198 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 EP400NLQ6ZTU2 488 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 DDX53Q86TM3 631 aaKnown RBP3.62□□□□□ -1.83
COPS3-213ENST00000577210 DCP2Q8IU60 420 aaKnown RBP3.62□□□□□ -1.83
COPS3-213ENST00000577210 RIOX2Q8IUF8 465 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 NIM1KQ8IY84 436 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 PPM1KQ8N3J5 372 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 POU5F2Q8N7G0 328 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 KREMEN2Q8NCW0 462 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 GSTCDQ8NEC7 633 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 NUP43Q8NFH3 380 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 MFSD3Q96ES6 412 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 CHAMP1Q96JM3 812 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 MCMBPQ9BTE3 642 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 AP5M1Q9H0R1 490 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 MBNL3Q9NUK0 354 aaKnown RBP3.62□□□□□ -1.83
COPS3-213ENST00000577210 GPR160Q9UJ42 338 aa3.62□□□□□ -1.83
COPS3-213ENST00000577210 USP2O75604 605 aaPredicted RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 DGKIO75912 1065 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 CYBBP04839 570 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 GLI1P08151 1106 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 PRKCAP17252 672 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 IBSPP21815 317 aaPredicted RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 SOX5P35711 763 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 IGFALSP35858 605 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 SLC6A11P48066 632 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 ST5P78524 1137 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 PABPC4Q13310 644 aaKnown RBP eCLIP3.61□□□□□ -1.83
COPS3-213ENST00000577210 SLC9A5Q14940 896 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 KCNMB1Q16558 191 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 ZNF648Q5T619 568 aaPredicted RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 YOD1Q5VVQ6 348 aaPredicted RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 FOXB2Q5VYV0 432 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 PAQR3Q6TCH7 311 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 KIF18BQ86Y91 864 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 CPNE8Q86YQ8 564 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 IRF2BP1Q8IU81 584 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 ZC3H7AQ8IWR0 971 aaKnown RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 TRIM48Q8IWZ4 208 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 Q8N1Y9 231 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 NLGN1Q8N2Q7 840 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 RCBTB1Q8NDN9 531 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 TRMT2BQ96GJ1 504 aaKnown RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 PEX11GQ96HA9 241 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 EPB41L1Q9H4G0 881 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 PCDH18Q9HCL0 1135 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 NGRNQ9NPE2 291 aaKnown RBP3.61□□□□□ -1.83
COPS3-213ENST00000577210 CLDND1Q9NY35 253 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 IMPACTQ9P2X3 320 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 NDOR1Q9UHB4 597 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 PCDHA2Q9Y5H9 948 aa3.61□□□□□ -1.83
COPS3-213ENST00000577210 C22orf46C9J442 243 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 WNT9AO14904 365 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 SRGAP3O43295 1099 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 OPA1O60313 960 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms