RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 MYPNQ86TC9 1320 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 A0A087X0B3 334 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 SMTNL1A8MU46 457 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 OPLAHO14841 1288 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 CFBP00751 764 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 CIITAP33076 1130 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 TECP42680 631 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 TXKP42681 527 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 OAZ1P54368 228 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 SEMA3FQ13275 785 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 Q4G0T1 1027 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 SH3D19Q5HYK7 790 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 CT47A1Q5JQC4 288 aaPredicted RBP15.55■□□□□ 0.08
TPM1-215ENST00000558868 CRYGNQ8WXF5 182 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 MAF1Q9H063 256 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 TAF1DQ9H5J8 278 aaPredicted RBP15.55■□□□□ 0.08
TPM1-215ENST00000558868 LRWD1Q9UFC0 647 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 AFG3L2Q9Y4W6 797 aa15.55■□□□□ 0.08
TPM1-215ENST00000558868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.54■□□□□ 0.08
TPM1-215ENST00000558868 GTPBP6O43824 516 aaPredicted RBP15.54■□□□□ 0.08
TPM1-215ENST00000558868 SLC37A4O43826 429 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 EDIL3O43854 480 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 ZNF76P36508 570 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 SARSP49591 514 aaKnown RBP15.54■□□□□ 0.08
TPM1-215ENST00000558868 HMGCS2P54868 508 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 GHRHRQ02643 423 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 VGLL4Q14135 290 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 IQCB1Q15051 598 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 C11orf57Q6ZUT1 292 aaPredicted RBP15.54■□□□□ 0.08
TPM1-215ENST00000558868 MLKLQ8NB16 471 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 SPATA20Q8TB22 786 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 ERCC4Q92889 916 aaPredicted RBP15.54■□□□□ 0.08
TPM1-215ENST00000558868 CDCA5Q96FF9 252 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 GSDMAQ96QA5 445 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
TPM1-215ENST00000558868 ZNF536O15090 1300 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PHIPQ8WWQ0 1821 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 BIN1O00499 593 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 HOXA13P31271 388 aaPredicted RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 DSG3P32926 999 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 HSD17B4P51659 736 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PRKG1Q13976 671 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 COG2Q14746 738 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 KARSQ15046 597 aaKnown RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PDXDC2PQ6P474 469 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 LUZP1Q86V48 1076 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 FCHSD1Q86WN1 690 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 ANKRD13AQ8IZ07 590 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PDLIM2Q96JY6 352 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 AGBL1Q96MI9 1066 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 GTPBP4Q9BZE4 634 aaKnown RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
TPM1-215ENST00000558868 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 HOXC10Q9NYD6 342 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 PCDHA12Q9UN75 941 aa15.53■□□□□ 0.08
TPM1-215ENST00000558868 VWA5AO00534 786 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 FOXN1O15353 648 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 AFMP43652 599 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 AMPD3Q01432 767 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 PPATQ06203 517 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 DPYDQ12882 1025 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 TKFCQ3LXA3 575 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 DPCR1Q3MIW9 517 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
TPM1-215ENST00000558868 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 ERO1BQ86YB8 467 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 LRRC27Q9C0I9 530 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
TPM1-215ENST00000558868 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 STK17AQ9UEE5 414 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 MAN1B1Q9UKM7 699 aa15.52■□□□□ 0.08
TPM1-215ENST00000558868 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 PP2D1A8MPX8 630 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 CXCL11O14625 94 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 IKBKBO14920 756 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 ALAS1P13196 640 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 MORC3Q14149 939 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 TTLL12Q14166 644 aaPredicted RBP15.51■□□□□ 0.07
TPM1-215ENST00000558868 CPXCR1Q8N123 301 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 CLEC4DQ8WXI8 215 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 HAS1Q92839 578 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
TPM1-215ENST00000558868 ADAMTS5Q9UNA0 930 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 FZD1Q9UP38 647 aa15.51■□□□□ 0.07
TPM1-215ENST00000558868 ATP2A1O14983 1001 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 ADCY5O95622 1261 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 PLCG1P19174 1290 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 CDC25AP30304 524 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
TPM1-215ENST00000558868 SETQ01105 290 aaPredicted RBP15.5■□□□□ 0.07
TPM1-215ENST00000558868 DGKZQ13574 1117 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms