RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 KCNK18Q7Z418 384 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 ZIM3Q96PE6 472 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 COL4A1P02462 1669 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 LAMB4A4D0S4 1761 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 F8W031 263 aaPredicted RBP18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 EEF1GP26641 437 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 TNNI2P48788 182 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 LLGL1Q15334 1064 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 NDST4Q9H3R1 872 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 ANKIB1Q9P2G1 1089 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 ADAMTS1Q9UHI8 967 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 CAPN7Q9Y6W3 813 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 ADAMTS7Q9UKP4 1686 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 MYMKA6NI61 221 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 DDAH1O94760 285 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 ERLIN2O94905 339 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 CAMTA2O94983 1202 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 CCNE1P24864 410 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 SIK1P57059 783 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 POLR2FP61218 127 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 RAPGEF1Q13905 1077 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 AP1M1Q9BXS5 423 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
PPP4R3A-208ENST00000555462 TRAF5O00463 557 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 UBE2SQ16763 222 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 NAA35Q5VZE5 725 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 CHADLQ6NUI6 762 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 FAM184BQ9ULE4 1060 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 HEXIM1O94992 359 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 PAFAH1B1P43034 410 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 NNTQ13423 1086 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 ICE2Q659A1 982 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 TADA2BQ86TJ2 420 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.623e-6■■■■■ 107.1
PPP4R3A-208ENST00000555462 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 CCDC40Q4G0X9 1142 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 LRRC47Q8N1G4 583 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 TMEM47Q9BQJ4 181 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 MAD2L2Q9UI95 211 aa18.91■□□□□ 0.62
PPP4R3A-208ENST00000555462 PALMO75781 387 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 CALML3P27482 149 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 TBC1D5Q92609 795 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 SLIT2O94813 1529 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 HSF2BPO75031 334 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 RHOBTB3O94955 611 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 OR52Z1P0C646 297 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 FECHP22830 423 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 PICALMQ13492 652 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 SLC30A10Q6XR72 485 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 PPM1EQ8WY54 764 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 TTYH3Q9C0H2 523 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 KBTBD4Q9NVX7 518 aa18.9■□□□□ 0.62
PPP4R3A-208ENST00000555462 ACTN1P12814 892 aa18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 TUBB2AQ13885 445 aa18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 BCAS3Q9H6U6 928 aa18.89■□□□□ 0.62
PPP4R3A-208ENST00000555462 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 SHTN1A0MZ66 631 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 SMIM23A6NLE4 172 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 TMCO5BA8MYB1 307 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 SLC37A4O43826 429 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 SLC16A2P36021 539 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 TRMT1LQ7Z2T5 733 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 CCDC47Q96A33 483 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 RNPC3Q96LT9 517 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 TLR10Q9BXR5 811 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 STIM2Q9P246 746 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 ANAPC4Q9UJX5 808 aa18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
PPP4R3A-208ENST00000555462 TAL1P17542 331 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 VWA3BQ502W6 1294 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 STXBP3O00186 592 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 KLRC1P26715 233 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 COPB2P35606 906 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 CFAP58Q5T655 872 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 TRIM58Q8NG06 486 aa18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 UHMK1Q8TAS1 419 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 AENQ8WTP8 325 aaKnown RBP18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-208ENST00000555462 INPP5BP32019 993 aa18.87■□□□□ 0.61
PPP4R3A-208ENST00000555462 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
PPP4R3A-208ENST00000555462 SNX29Q8TEQ0 813 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms