RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 PFKMP08237 780 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 CSF2RAP15509 400 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
PNN-203ENST00000554117 WTAPQ15007 396 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 RAB30Q15771 203 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.416e-21■■■□□ 18.2
PNN-203ENST00000554117 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
PNN-203ENST00000554117 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 SIP14410 1827 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 ASTN1O14525 1302 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 RBM47A0AV96 593 aaKnown RBP12.49□□□□□ -0.41
PNN-203ENST00000554117 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 GH1P01241 217 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
PNN-203ENST00000554117 DNAJB2P25686 324 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 ITGB8P26012 769 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 BFSP2Q13515 415 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 QRICH1Q2TAL8 776 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 CLEC4DQ8WXI8 215 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 TIFAQ96CG3 184 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
PNN-203ENST00000554117 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
PNN-203ENST00000554117 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
PNN-203ENST00000554117 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 B4GALT4O60513 344 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 KIF5BP33176 963 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 CYP2C18P33260 490 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 RFC2P35250 354 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 PSMC6P62333 389 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
PNN-203ENST00000554117 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
PNN-203ENST00000554117 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
PNN-203ENST00000554117 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
PNN-203ENST00000554117 GUCD1Q96NT3 240 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
PNN-203ENST00000554117 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
PNN-203ENST00000554117 ZBTB5O15062 677 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 CTAGE5O15320 804 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 EIF3JO75822 258 aaKnown RBP12.47□□□□□ -0.41
PNN-203ENST00000554117 ACRP10323 421 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 CCL23P55773 120 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 DGKDQ16760 1214 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
PNN-203ENST00000554117 CUL5Q93034 780 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 SLC28A3Q9HAS3 691 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
PNN-203ENST00000554117 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 SLC4A7Q9Y6M7 1214 aa12.47□□□□□ -0.41
PNN-203ENST00000554117 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 PARNO95453 639 aaKnown RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 MYCLP12524 364 aaPredicted RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 EIF2AK2P19525 551 aaKnown RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 EDNRBP24530 442 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 CHMLP26374 656 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 EPHB4P54760 987 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 IRX6P78412 446 aaPredicted RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 TMEM67Q5HYA8 995 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 NFXL1Q6ZNB6 911 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 TMTC2Q8N394 836 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 HERVK_113Q902F9 699 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 TAAR1Q96RJ0 339 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
PNN-203ENST00000554117 JMJD4Q9H9V9 463 aa12.46□□□□□ -0.41
PNN-203ENST00000554117 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 A6NJR5 290 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 GCOM1H8Y6P7 765 aaPredicted RBP12.45□□□□□ -0.42
PNN-203ENST00000554117 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 POLR2MP0CAP2 368 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 GSPT1P15170 499 aaKnown RBP12.45□□□□□ -0.42
PNN-203ENST00000554117 CCND2P30279 289 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 GNAQP50148 359 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 LAMC2Q13753 1193 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
PNN-203ENST00000554117 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms