RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 NMT2O60551 498 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 EFCAB14O75071 495 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
PFDN5-212ENST00000550880 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
PFDN5-212ENST00000550880 PI4K2BG5E9Z4 385 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
PFDN5-212ENST00000550880 SELPP16109 830 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 WDR5P61964 334 aaKnown RBP13.04□□□□□ -0.32
PFDN5-212ENST00000550880 ZMYM1Q5SVZ6 1142 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 SLC30A10Q6XR72 485 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
PFDN5-212ENST00000550880 RAD9AQ99638 391 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 DCTPP1Q9H773 170 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
PFDN5-212ENST00000550880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
PFDN5-212ENST00000550880 ABHD14A-ACY1A0A1B0GW23 586 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 FAM86C2PA6NEL3 165 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 LPXNO60711 386 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 CASTP20810 708 aaKnown RBP13.03□□□□□ -0.32
PFDN5-212ENST00000550880 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
PFDN5-212ENST00000550880 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 RASGRP2Q7LDG7 609 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 COPS5Q92905 334 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 ANAPC4Q9UJX5 808 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
PFDN5-212ENST00000550880 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-212ENST00000550880 ORC4O43929 436 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 GJB5O95377 273 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 GH1P01241 217 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 ALADP13716 330 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 EDNRBP24530 442 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-212ENST00000550880 NOVP48745 357 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 IKBKEQ14164 716 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 RRP12Q5JTH9 1297 aaKnown RBP13.02□□□□□ -0.33
PFDN5-212ENST00000550880 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 GJD3Q8N144 294 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 C7orf31Q8N865 590 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 KATNAL1Q9BW62 490 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-212ENST00000550880 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 INCENPQ9NQS7 918 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
PFDN5-212ENST00000550880 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 TRANK1O15050 2925 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 PRR33A8MZF0 331 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 MMP3P08254 477 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 ERVK-21P61565 698 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 DGKDQ16760 1214 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
PFDN5-212ENST00000550880 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-212ENST00000550880 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 MAF1Q9H063 256 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
PFDN5-212ENST00000550880 REV3LO60673 3130 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
PFDN5-212ENST00000550880 CXCL10P02778 98 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 PDHBP11177 359 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 CKBP12277 381 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 KCNA5P22460 613 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 DEFB103AP81534 67 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 PTPROQ16827 1216 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 SEPT14Q6ZU15 432 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 CHST3Q7LGC8 479 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
PFDN5-212ENST00000550880 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 KHSRPQ92945 711 aaKnown RBP eCLIP13□□□□□ -0.33
PFDN5-212ENST00000550880 TTC14Q96N46 770 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 UIMC1Q96RL1 719 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 C11orf16Q9NQ32 467 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
PFDN5-212ENST00000550880 INSL6Q9Y581 213 aa13□□□□□ -0.33
PFDN5-212ENST00000550880 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 ARIH2O95376 493 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 FGRP09769 529 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 RBL2Q08999 1139 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 PTK7Q13308 1070 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 STXBP2Q15833 593 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 USH1GQ495M9 461 aa12.99□□□□□ -0.33
PFDN5-212ENST00000550880 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
PFDN5-212ENST00000550880 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms