RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CTU1Q7Z7A3 348 aaKnown RBP18.68■□□□□ 0.58
LIMS2-217ENST00000545738 BLIDQ8IZY5 108 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 CCDC12Q8WUD4 166 aaPredicted RBP18.68■□□□□ 0.58
LIMS2-217ENST00000545738 RMDN3Q96TC7 470 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 C6orf50Q9HD87 102 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 PRDM10Q9NQV6 1147 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 PXMP2Q9NR77 195 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 RPTORQ8N122 1335 aa18.68■□□□□ 0.58
LIMS2-217ENST00000545738 DNAH12Q6ZR08 3092 aa18.67■□□□□ 0.58
LIMS2-217ENST00000545738 MRPL12P52815 198 aaKnown RBP18.67■□□□□ 0.58
LIMS2-217ENST00000545738 PKP1Q13835 747 aa18.67■□□□□ 0.58
LIMS2-217ENST00000545738 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
LIMS2-217ENST00000545738 MAP3K20Q9NYL2 800 aaKnown RBP18.67■□□□□ 0.58
LIMS2-217ENST00000545738 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
LIMS2-217ENST00000545738 SYT1P21579 422 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 EDNRBP24530 442 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 GNA11P29992 359 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 CYP2C19P33261 490 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 DIS3L2Q8IYB7 885 aaKnown RBP18.66■□□□□ 0.58
LIMS2-217ENST00000545738 CRYGNQ8WXF5 182 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 PDCD2LQ9BRP1 358 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 ANO3Q9BYT9 981 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 DIS3Q9Y2L1 958 aaKnown RBP18.66■□□□□ 0.58
LIMS2-217ENST00000545738 ADCY3O60266 1144 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 HOXD10P28358 340 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 PGM5Q15124 567 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 MAMDC4Q6UXC1 1216 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 RAET1EQ8TD07 263 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 MAF1Q9H063 256 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 KATNBL1Q9H079 304 aa18.66■□□□□ 0.58
LIMS2-217ENST00000545738 WNT7AO00755 349 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
LIMS2-217ENST00000545738 BECN1Q14457 450 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 PRAMEF19Q5SWL8 479 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 LARP1BQ659C4 914 aaKnown RBP18.65■□□□□ 0.58
LIMS2-217ENST00000545738 ARMCX2Q7L311 632 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 ZNF467Q7Z7K2 595 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-217ENST00000545738 FAM177A1Q8N128 213 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-217ENST00000545738 DNERQ8NFT8 737 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 MORC4Q8TE76 937 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 TINF2Q9BSI4 451 aa18.65■□□□□ 0.58
LIMS2-217ENST00000545738 RGS20O76081 388 aa18.64■□□□□ 0.57
LIMS2-217ENST00000545738 XBP1P17861 261 aa18.64■□□□□ 0.57
LIMS2-217ENST00000545738 OLFML2BQ68BL8 750 aa18.64■□□□□ 0.57
LIMS2-217ENST00000545738 TRPV1Q8NER1 839 aa18.64■□□□□ 0.57
LIMS2-217ENST00000545738 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
LIMS2-217ENST00000545738 HSP90AA1P07900 732 aaKnown RBP18.63■□□□□ 0.57
LIMS2-217ENST00000545738 NR3C2P08235 984 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 PTGS1P23219 599 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 KRT2P35908 639 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
LIMS2-217ENST00000545738 AP3B2Q13367 1082 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 TMEM63BQ5T3F8 832 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 ARHGEF16Q5VV41 709 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 GALNT17Q6IS24 598 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 SPDYE3A6NKU9 549 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 SREBF1P36956 1147 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 PRMT2P55345 433 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 TRIM29Q14134 588 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 PIK3AP1Q6ZUJ8 805 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-217ENST00000545738 CYP2W1Q8TAV3 490 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 PXYLP1Q8TE99 480 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 GLT8D2Q9H1C3 349 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-217ENST00000545738 ADD3Q9UEY8 706 aaKnown RBP18.63■□□□□ 0.57
LIMS2-217ENST00000545738 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
LIMS2-217ENST00000545738 ADCY6O43306 1168 aa18.62■□□□□ 0.57
LIMS2-217ENST00000545738 GRK4P32298 578 aa18.62■□□□□ 0.57
LIMS2-217ENST00000545738 CACNB2Q08289 660 aaPredicted RBP18.62■□□□□ 0.57
LIMS2-217ENST00000545738 VSIG10LQ86VR7 867 aa18.62■□□□□ 0.57
LIMS2-217ENST00000545738 PDGFCQ9NRA1 345 aa18.62■□□□□ 0.57
LIMS2-217ENST00000545738 SYNGAP1Q96PV0 1343 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
LIMS2-217ENST00000545738 U2AF2P26368 475 aaKnown RBP eCLIP18.61■□□□□ 0.57
LIMS2-217ENST00000545738 DDIT3P35638 169 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 INF2Q27J81 1249 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 FBXO46Q6PJ61 603 aaPredicted RBP18.61■□□□□ 0.57
LIMS2-217ENST00000545738 TBCKQ8TEA7 893 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 SLC5A4Q9NY91 659 aa18.61■□□□□ 0.57
LIMS2-217ENST00000545738 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 FOSP01100 380 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 INHAP05111 366 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 ZNF865P0CJ78 1059 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 CYBAP13498 195 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 ITGB5P18084 799 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 ARHGAP4P98171 946 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 COL13A1Q5TAT6 717 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 FERMT3Q86UX7 667 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 SLAIN1Q8ND83 568 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 MCOLN1Q9GZU1 580 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 RTEL1Q9NZ71 1219 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms