RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 STK3Q13188 491 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
DDX55-206ENST00000539934 ISM2Q6H9L7 571 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 LRRC49Q8IUZ0 686 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 MAB21L3Q8N8X9 362 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 DTNBP1Q96EV8 351 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 SLC39A3Q9BRY0 314 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 MXD3Q9BW11 206 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 RPAP3Q9H6T3 665 aaPredicted RBP14.03□□□□□ -0.16
DDX55-206ENST00000539934 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
DDX55-206ENST00000539934 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.16
DDX55-206ENST00000539934 ZNF213O14771 459 aa14.02□□□□□ -0.16
DDX55-206ENST00000539934 IQCA1Q86XH1 822 aa14.02□□□□□ -0.16
DDX55-206ENST00000539934 SPATS2Q86XZ4 545 aaKnown RBP14.02□□□□□ -0.16
DDX55-206ENST00000539934 BRF1Q92994 677 aa14.02□□□□□ -0.16
DDX55-206ENST00000539934 MPHOSPH6Q99547 160 aaKnown RBP14.02□□□□□ -0.16
DDX55-206ENST00000539934 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.16
DDX55-206ENST00000539934 SLC7A5P2Q9GIP4 190 aa14.02□□□□□ -0.16
DDX55-206ENST00000539934 DNAAF2Q9NVR5 837 aaKnown RBP14.02□□□□□ -0.16
DDX55-206ENST00000539934 GOLGA6L10A6NI86 522 aa14.02□□□□□ -0.17
DDX55-206ENST00000539934 STX6O43752 255 aa14.02□□□□□ -0.17
DDX55-206ENST00000539934 PARNO95453 639 aaKnown RBP14.02□□□□□ -0.17
DDX55-206ENST00000539934 SYT1P21579 422 aa14.02□□□□□ -0.17
DDX55-206ENST00000539934 LRRC23Q53EV4 343 aaPredicted RBP14.02□□□□□ -0.17
DDX55-206ENST00000539934 CWF19L1Q69YN2 538 aaKnown RBP14.02□□□□□ -0.17
DDX55-206ENST00000539934 SH3GL1Q99961 368 aa14.02□□□□□ -0.17
DDX55-206ENST00000539934 TRIM4Q9C037 500 aa14.02□□□□□ -0.17
DDX55-206ENST00000539934 UFL1O94874 794 aa14.01□□□□□ -0.17
DDX55-206ENST00000539934 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
DDX55-206ENST00000539934 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
DDX55-206ENST00000539934 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
DDX55-206ENST00000539934 OLFML1Q6UWY5 402 aa14.01□□□□□ -0.17
DDX55-206ENST00000539934 ZMAT5Q9UDW3 170 aaKnown RBP14.01□□□□□ -0.17
DDX55-206ENST00000539934 DTNBO60941 627 aa14□□□□□ -0.17
DDX55-206ENST00000539934 MBD4O95243 580 aa14□□□□□ -0.17
DDX55-206ENST00000539934 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
DDX55-206ENST00000539934 RPS12P25398 132 aaKnown RBP14□□□□□ -0.17
DDX55-206ENST00000539934 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
DDX55-206ENST00000539934 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
DDX55-206ENST00000539934 OSBPL9Q96SU4 736 aa14□□□□□ -0.17
DDX55-206ENST00000539934 CORO1BQ9BR76 489 aa14□□□□□ -0.17
DDX55-206ENST00000539934 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
DDX55-206ENST00000539934 DENND2AQ9ULE3 1009 aa14□□□□□ -0.17
DDX55-206ENST00000539934 TRIOBPQ9H2D6 2365 aa14□□□□□ -0.17
DDX55-206ENST00000539934 TCHHQ07283 1943 aa14□□□□□ -0.17
DDX55-206ENST00000539934 GPR25O00155 361 aa14□□□□□ -0.17
DDX55-206ENST00000539934 CEP104O60308 925 aa14□□□□□ -0.17
DDX55-206ENST00000539934 EXOSC10Q01780 885 aaKnown RBP14□□□□□ -0.17
DDX55-206ENST00000539934 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
DDX55-206ENST00000539934 Q4G0T1 1027 aa14□□□□□ -0.17
DDX55-206ENST00000539934 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
DDX55-206ENST00000539934 SLF2Q8IX21 1173 aa14□□□□□ -0.17
DDX55-206ENST00000539934 PDILTQ8N807 584 aa14□□□□□ -0.17
DDX55-206ENST00000539934 DHTKD1Q96HY7 919 aaPredicted RBP14□□□□□ -0.17
DDX55-206ENST00000539934 STRBPQ96SI9 672 aaKnown RBP14□□□□□ -0.17
DDX55-206ENST00000539934 ZNF510Q9Y2H8 683 aa14□□□□□ -0.17
DDX55-206ENST00000539934 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 CHST3Q7LGC8 479 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 C17orf53Q8N3J3 647 aaPredicted RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 CCDC150Q8NCX0 1101 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 NCOA7Q8NI08 942 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 RBM41Q96IZ5 413 aaKnown RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 CHAMP1Q96JM3 812 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 CABS1Q96KC9 395 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 CAPS2Q9BXY5 557 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 ARMT1Q9H993 441 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 PPFIA3O75145 1194 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 IL4RP24394 825 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 KLRK1P26718 216 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 ROR2Q01974 943 aaKnown RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
DDX55-206ENST00000539934 USP33Q8TEY7 942 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 DDX12PQ92771 950 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 EYA3Q99504 573 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 LMBRD1Q9NUN5 540 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
DDX55-206ENST00000539934 COL1A1P02452 1464 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 TMEM221A6NGB7 291 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 SEMA3EO15041 775 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 NAPBQ9H115 298 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 ITGB1BP2Q9UKP3 347 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 POLR3GO15318 223 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 MTA2O94776 668 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 F13A1P00488 732 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 GNAT2P19087 354 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 PDCP20941 246 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
DDX55-206ENST00000539934 SLC30A9Q6PML9 568 aa13.98□□□□□ -0.17
DDX55-206ENST00000539934 FBXO33Q7Z6M2 555 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms