RNA–Protein interactions for RNA: ENST00000516161.1

RNU1-41P-201, Transcript of RNA, U1 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU1-41P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-41P-201ENST00000516161 SMPD1P17405 629 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 VCAM1P19320 739 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 FZD5Q13467 585 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 MTMR3Q13615 1198 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 NFE2L2Q16236 605 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 TRIM71Q2Q1W2 868 aaKnown RBP3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 COL28A1Q2UY09 1125 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 C19orf48Q6RUI8 117 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZDHHC14Q8IZN3 488 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 MSL3Q8N5Y2 521 aaKnown RBP3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZNF579Q8NAF0 562 aaKnown RBP3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 ACER1Q8TDN7 264 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZNF689Q96CS4 500 aaPredicted RBP3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 PURBQ96QR8 312 aaKnown RBP3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 ADAM33Q9BZ11 813 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 KIAA1683Q9H0B3 1180 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 MROH8Q9H579 483 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 TSPYL4Q9UJ04 414 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 FAM184BQ9ULE4 1060 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 TIMELESSQ9UNS1 1208 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 IVNS1ABPQ9Y6Y0 642 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 LAMA4Q16363 1823 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 COL4A2P08572 1712 aa3.02□□□□□ -1.93
RNU1-41P-201ENST00000516161 LRRK2Q5S007 2527 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 CUBNO60494 3623 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 WDR81Q562E7 1941 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 KIF16BQ96L93 1317 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 APCP25054 2843 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 A0A1W2PRG0 241 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 SPTLC1O15269 473 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 LRP3O75074 770 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 CABYRO75952 493 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 DDX58O95786 925 aaKnown RBP3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 RB1P06400 928 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 ASNSP08243 561 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 BMPR1AP36894 532 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 KCNJ4P48050 445 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 PURAQ00577 322 aaKnown RBP3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TBC1D8BQ0IIM8 1120 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 SPEM2Q0P670 501 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 C19orf57Q0VDD7 668 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TROAPQ12815 778 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 ACVR2BQ13705 512 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TMEM132BQ14DG7 1078 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 CSRP2Q16527 193 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TAPT1Q6NXT6 567 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TATDN1Q6P1N9 297 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 CNKSR3Q6P9H4 555 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 USP17L2Q6R6M4 530 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 UBE3BQ7Z3V4 1068 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZNF467Q7Z7K2 595 aaPredicted RBP3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 MAGEB6Q8N7X4 407 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 SPPL3Q8TCT6 385 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 WNT8BQ93098 351 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 RUNDC1Q96C34 613 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 SIL1Q9H173 461 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 POMKQ9H5K3 350 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 IGFLR1Q9H665 355 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 AS3MTQ9HBK9 375 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 GINM1Q9NU53 330 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 HERC5Q9UII4 1024 aaKnown RBP3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 ADAMTS8Q9UP79 889 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 PLAGL2Q9UPG8 496 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 MUC22E2RYF6 1773 aaPredicted RBP3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 NOTCH4Q99466 2003 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 VPS13CQ709C8 3753 aa3.01□□□□□ -1.93
RNU1-41P-201ENST00000516161 TNRC6BQ9UPQ9 1833 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 TACC2O95359 2948 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 FBN1P35555 2871 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 ANKRD18BA2A2Z9 1011 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 GIPC1O14908 333 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 TBC1D4O60343 1298 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 KINO60870 393 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 LRRN2O75325 713 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZNF853P0CG23 659 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 FCER1AP12319 257 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 RBM25P49756 843 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 CHAF1AQ13111 956 aaPredicted RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 HIC1Q14526 733 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 COG2Q14746 738 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 LRRFIP1Q32MZ4 808 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 HDGFL1Q5TGJ6 251 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 WDR78Q5VTH9 848 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 PHLDB3Q6NSJ2 640 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 KSR2Q6VAB6 950 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 LDHAL6AQ6ZMR3 332 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 PRR23CQ6ZRP0 262 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 EP400NLQ6ZTU2 488 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 RIOX2Q8IUF8 465 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 CCAR1Q8IX12 1150 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZNF687Q8N1G0 1237 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 SERBP1Q8NC51 408 aaKnown RBP eCLIP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 FLCNQ8NFG4 579 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 SPATA18Q8TC71 538 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 RASGRP4Q8TDF6 673 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 PPP1R13LQ8WUF5 828 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 ZCCHC14Q8WYQ9 949 aaKnown RBP3□□□□□ -1.93
RNU1-41P-201ENST00000516161 KIF12Q96FN5 646 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 CRELD1Q96HD1 420 aa3□□□□□ -1.93
RNU1-41P-201ENST00000516161 DDX23Q9BUQ8 820 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms