RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	STK11IP	Q8N1F8	1099 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ATL2	Q8NHH9	583 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	PCDH19	Q8TAB3	1148 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	WNK4	Q96J92	1243 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	MTFR1L	Q9H019	292 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ADAMTS10	Q9H324	1103 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	EBF1	Q9UH73	591 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	FBXL7	Q9UJT9	491 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SLC5A6	Q9Y289	635 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ZNF281	Q9Y2X9	895 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	COQ6	Q9Y2Z9	468 aa		4.36	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ARVCF	O00192	962 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	COBL	O75128	1261 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	RAB11FIP3	O75154	756 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	USP2	O75604	605 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	MED26	O95402	600 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SOD2	P04179	222 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	KCNA6	P17658	529 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	POU3F2	P20265	443 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CDK11B	P21127	795 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SSTR4	P31391	388 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	BCL6	P41182	706 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CDKN1C	P49918	316 aa	Predicted RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	RPL11	P62913	178 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	STRN3	Q13033	797 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	DUSP4	Q13115	394 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	LSAMP	Q13449	338 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SEPT7	Q16181	437 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	KIZ	Q2M2Z5	673 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	RALGPS1	Q5JS13	557 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SPRED2	Q7Z698	418 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	DDX53	Q86TM3	631 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	IGSF22	Q8N9C0	903 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	PRPF38A	Q8NAV1	312 aa	Known RBP	4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	DPF3	Q92784	378 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	MAP6	Q96JE9	813 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	HHIPL1	Q96JK4	782 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	JMJD8	Q96S16	334 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	KCNJ15	Q99712	375 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	G6PC3	Q9BUM1	346 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	IPPK	Q9H8X2	491 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CLDND1	Q9NY35	253 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	LMCD1	Q9NZU5	365 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	TNFRSF10D	Q9UBN6	386 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	GULP1	Q9UBP9	304 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	MCM8	Q9UJA3	840 aa		4.35	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	LOC100996750	A0A140TA64	210 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	FADS2P1	A8MWK0	482 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	FAM47E-STBD1	D6RA91	191 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784		M0R2C6	588 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	PPP1R11	O60927	126 aa	Predicted RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	GLRX3	O76003	335 aa	Known RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	GRK2	P25098	689 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	GRK3	P35626	688 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CEBPA	P49715	358 aa	Predicted RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	DNM2	P50570	870 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	RTP1	P59025	263 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ST5	P78524	1137 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	FAM50A	Q14320	339 aa	Known RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	FAM47C	Q5HY64	1035 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	WWC2	Q6AWC2	1192 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CEP128	Q6ZU80	1094 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CEP68	Q76N32	757 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	AFAP1L2	Q8N4X5	818 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	LINC01599	Q8WXQ3	324 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	ALPK1	Q96QP1	1244 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	JAM3	Q9BX67	310 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	KRTAP4-6	Q9BYQ5	205 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	PRDM7	Q9NQW5	492 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	DDX56	Q9NY93	547 aa	Known RBP	4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	CCDC39	Q9UFE4	941 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784	RWDD3	Q9Y3V2	267 aa		4.34	□□□□□ -1.71
CALCOCO2-216	ENST00000509784		A0A1W2PQ27	194 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784		A0A1W2PQ45	241 aa	Predicted RBP	4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784		A0A1W2PQ64	194 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784		A0A1W2PQC6	194 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784		A0A1W2PQD8	194 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784		A0A1W2PQY0	241 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	CCDC66	A2RUB6	948 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	WTIP	A6NIX2	430 aa	Predicted RBP	4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	ZNF891	A8MT65	544 aa	Predicted RBP	4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	NPTXR	O95502	500 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	FUCA1	P04066	466 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	CKM	P06732	381 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	ZGLP1	P0C6A0	271 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	PYGM	P11217	842 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	CPE	P16870	476 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	FPR2	P25090	351 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	KIR2DL1	P43626	348 aa	Predicted RBP	4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	KIR2DL2	P43627	348 aa	Predicted RBP	4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	SCNN1B	P51168	640 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	GTF2A2	P52657	109 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	HK2	P52789	917 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	SLC14A2	Q15849	920 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	SLCO6A1	Q86UG4	719 aa		4.33	□□□□□ -1.72
CALCOCO2-216	ENST00000509784	WFDC3	Q8IUB2	231 aa		4.33	□□□□□ -1.72

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