RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GTF2A2P52657 109 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 CORO7P57737 925 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 RPL11P62913 178 aaKnown RBP5.69□□□□□ -1.5
CD46-216ENST00000490278 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 DALRD3Q5D0E6 543 aaKnown RBP5.69□□□□□ -1.5
CD46-216ENST00000490278 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 BRAPQ7Z569 592 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 LILRA2Q8N149 483 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 MYLIPQ8WY64 445 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 C19orf44Q9H6X5 657 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 SP110Q9HB58 689 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 TRIM39Q9HCM9 518 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
CD46-216ENST00000490278 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.69□□□□□ -1.5
CD46-216ENST00000490278 OAS3Q9Y6K5 1087 aaKnown RBP5.69□□□□□ -1.5
CD46-216ENST00000490278 PSPNO60542 156 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 APPP05067 770 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 PRKCAP17252 672 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 TRHRP34981 398 aaPredicted RBP5.68□□□□□ -1.5
CD46-216ENST00000490278 BCL6P41182 706 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 AFMP43652 599 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 LSAMPQ13449 338 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 SNX17Q15036 470 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 KIZQ2M2Z5 673 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 TIGD5Q53EQ6 642 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 MTDHQ86UE4 582 aaKnown RBP5.68□□□□□ -1.5
CD46-216ENST00000490278 NIM1KQ8IY84 436 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 NUP43Q8NFH3 380 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 DPF3Q92784 378 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 CHAMP1Q96JM3 812 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 MAGEB10Q96LZ2 347 aaPredicted RBP5.68□□□□□ -1.5
CD46-216ENST00000490278 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 GULP1Q9UBP9 304 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 GPR160Q9UJ42 338 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 ACSL6Q9UKU0 697 aa5.68□□□□□ -1.5
CD46-216ENST00000490278 PPP1R11O60927 126 aaPredicted RBP5.67□□□□□ -1.5
CD46-216ENST00000490278 CRTAMO95727 393 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 MVKQ03426 396 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 ZNF662Q6ZS27 426 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 FGD2Q7Z6J4 655 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 NLRX1Q86UT6 975 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 DHX37Q8IY37 1157 aaKnown RBP5.67□□□□□ -1.5
CD46-216ENST00000490278 ABHD4Q8TB40 342 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 MFSD3Q96ES6 412 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 SCLYQ96I15 445 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 ALG1Q9BT22 464 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 PDLIM7Q9NR12 457 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 INTS7Q9NVH2 962 aaKnown RBP5.67□□□□□ -1.5
CD46-216ENST00000490278 BTG4Q9NY30 223 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.67□□□□□ -1.5
CD46-216ENST00000490278 MARCH2Q9P0N8 246 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 MAGEC2Q9UBF1 373 aaPredicted RBP5.67□□□□□ -1.5
CD46-216ENST00000490278 RWDD3Q9Y3V2 267 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 PCDHA9Q9Y5H5 950 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 PCDHA8Q9Y5H6 950 aa5.67□□□□□ -1.5
CD46-216ENST00000490278 IRS4O14654 1257 aaPredicted RBP5.66□□□□□ -1.5
CD46-216ENST00000490278 DNAJC8O75937 253 aaPredicted RBP5.66□□□□□ -1.5
CD46-216ENST00000490278 RASGRP1O95267 797 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 MSL3P1P0C860 447 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 CYP4F8P98187 520 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 TM4SF20Q53R12 229 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 CBLL1Q75N03 491 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 CEP68Q76N32 757 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 ATG4DQ86TL0 474 aaPredicted RBP5.66□□□□□ -1.5
CD46-216ENST00000490278 Q8N1Y9 231 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 LZTR1Q8N653 840 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 TMEM169Q96HH4 297 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 MTA3Q9BTC8 594 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 TMX1Q9H3N1 280 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 CRTAC1Q9NQ79 661 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 CLDND1Q9NY35 253 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 ADGRE2Q9UHX3 823 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 FBXL7Q9UJT9 491 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 PRKAB1Q9Y478 270 aa5.66□□□□□ -1.5
CD46-216ENST00000490278 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TCRBV16S1A1N1A0A5B0 115 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 C22orf46C9J442 243 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 H7BY64 318 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 ARVCFO00192 962 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 EFEMP2O95967 443 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 FUCA1P04066 466 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 SOD2P04179 222 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 ASLP04424 464 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 PNLIPP16233 465 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
CD46-216ENST00000490278 SDSP20132 328 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 FPR2P25090 351 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 GRK2P25098 689 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TACR1P25103 407 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 GRK3P35626 688 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 IGFALSP35858 605 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 ARL4AP40617 200 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 TXKP42681 527 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 PAK1Q13153 545 aa5.65□□□□□ -1.5
CD46-216ENST00000490278 RNF187Q5TA31 235 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms