RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KIF3AQ9Y496 699 aa22.23■■□□□ 1.15
PCOLCE-208ENST00000487172 FCHSD1Q86WN1 690 aa22.22■■□□□ 1.15
PCOLCE-208ENST00000487172 IWS1Q96ST2 819 aa22.22■■□□□ 1.15
PCOLCE-208ENST00000487172 PXMP2Q9NR77 195 aa22.22■■□□□ 1.15
PCOLCE-208ENST00000487172 PCDHA4Q9UN74 947 aa22.22■■□□□ 1.15
PCOLCE-208ENST00000487172 SMC3Q9UQE7 1217 aa22.22■■□□□ 1.15
PCOLCE-208ENST00000487172 EDNRBP24530 442 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 GJB2P29033 226 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 AP3B2Q13367 1082 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 NPY5RQ15761 445 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 UBE2SQ16763 222 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 SLC9C1Q4G0N8 1177 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 MAP3K21Q5TCX8 1036 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 ARHGEF16Q5VV41 709 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 NRBP1Q9UHY1 535 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 PCDHA6Q9UN73 950 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 PCDHA8Q9Y5H6 950 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 FRMPD4Q14CM0 1322 aa22.21■■□□□ 1.15
PCOLCE-208ENST00000487172 SPDYE3A6NKU9 549 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 SNAI1O95863 264 aaPredicted RBP22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 COL13A1Q5TAT6 717 aaPredicted RBP22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 ARMCX2Q7L311 632 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 BLIDQ8IZY5 108 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 REXO1Q8N1G1 1221 aaKnown RBP22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 ARMC5Q96C12 935 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 PDCD2LQ9BRP1 358 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 GJB4Q9NTQ9 266 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 KCNJ14Q9UNX9 436 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 RPTORQ8N122 1335 aa22.2■■□□□ 1.14
PCOLCE-208ENST00000487172 M0R2N6 131 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 CYP2C19P33261 490 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 UBXN2AP68543 259 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 TRIM29Q14134 588 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 KRT40Q6A162 431 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 FBXO18Q8NFZ0 1043 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 SH3TC2Q8TF17 1288 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 C8orf76Q96K31 380 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 ABHD16BQ9H3Z7 469 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 EHMT1Q9H9B1 1298 aa22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 BIN2Q9UBW5 565 aaPredicted RBP22.19■■□□□ 1.14
PCOLCE-208ENST00000487172 ADAMTS3O15072 1205 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 MMP1P03956 469 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 INHAP05111 366 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 NR3C2P08235 984 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 CACNB2Q08289 660 aaPredicted RBP22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 TRIM32Q13049 653 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 PGM5Q15124 567 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 VSIG10LQ86VR7 867 aa22.18■■□□□ 1.14
PCOLCE-208ENST00000487172 EIF2AK2P19525 551 aaKnown RBP22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 PDE4DQ08499 809 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 STXBP2Q15833 593 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 JAKMIP3Q5VZ66 844 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 XRRA1Q6P2D8 792 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 ANO3Q9BYT9 981 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 KATNBL1Q9H079 304 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 TMEM260Q9NX78 707 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 CNPY2Q9Y2B0 182 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 MCM3APO60318 1980 aa22.17■■□□□ 1.14
PCOLCE-208ENST00000487172 STAM2O75886 525 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 CYBAP13498 195 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 PRKAR2AP13861 404 aaKnown RBP22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 ACVR2BQ13705 512 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 BECN1Q14457 450 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 ZNF333Q96JL9 665 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 BRMS1Q9HCU9 246 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 VTA1Q9NP79 307 aa22.16■■□□□ 1.14
PCOLCE-208ENST00000487172 LRRC37A2A6NM11 1700 aa22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 EIF3JO75822 258 aaKnown RBP22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 ZNF865P0CJ78 1059 aaPredicted RBP22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 CCND2P30279 289 aa22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 KRT2P35908 639 aa22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 PCNX4Q63HM2 1172 aa22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 HMX1Q9NP08 348 aaPredicted RBP22.15■■□□□ 1.14
PCOLCE-208ENST00000487172 SREBF1P36956 1147 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 SAFBQ15424 915 aaKnown RBP eCLIP22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 PRAMEF19Q5SWL8 479 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 TRPV1Q8NER1 839 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 IL31RAQ8NI17 732 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 RASGRP4Q8TDF6 673 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 CRYGNQ8WXF5 182 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 PGBD1Q96JS3 809 aa22.14■■□□□ 1.13
PCOLCE-208ENST00000487172 RBM47A0AV96 593 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 CYP3A4P08684 503 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 MYCLP12524 364 aaPredicted RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 FOSBP53539 338 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 MRPS9P82933 396 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 LARP1BQ659C4 914 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 TAPT1Q6NXT6 567 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 KRT25Q7Z3Z0 450 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 DIS3L2Q8IYB7 885 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 OXER1Q8TDS5 423 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 TNFRSF25Q93038 417 aa22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 DDX49Q9Y6V7 483 aaKnown RBP22.13■■□□□ 1.13
PCOLCE-208ENST00000487172 BTBD18B2RXH4 712 aa22.12■■□□□ 1.13
PCOLCE-208ENST00000487172 PDCP20941 246 aa22.12■■□□□ 1.13
PCOLCE-208ENST00000487172 GUCY1B3Q02153 619 aa22.12■■□□□ 1.13
PCOLCE-208ENST00000487172 SEPT4O43236 478 aa22.11■■□□□ 1.13
PCOLCE-208ENST00000487172 HSP90AA1P07900 732 aaKnown RBP22.11■■□□□ 1.13
PCOLCE-208ENST00000487172 CCL5P13501 91 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms