RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
NUP50-216ENST00000486184 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
NUP50-216ENST00000486184 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
NUP50-216ENST00000486184 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
NUP50-216ENST00000486184 TBC1D5Q92609 795 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 RMDN3Q96TC7 470 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
NUP50-216ENST00000486184 MYH7BA7E2Y1 1941 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
NUP50-216ENST00000486184 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
NUP50-216ENST00000486184 GJB2P29033 226 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
NUP50-216ENST00000486184 UBXN2AP68543 259 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 GHRHRQ02643 423 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 PDE4DQ08499 809 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 CUL4AQ13619 759 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
NUP50-216ENST00000486184 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
NUP50-216ENST00000486184 CCL14Q16627 93 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
NUP50-216ENST00000486184 TRIB2Q92519 343 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 TINF2Q9BSI4 451 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
NUP50-216ENST00000486184 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 MEIS2O14770 477 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
NUP50-216ENST00000486184 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
NUP50-216ENST00000486184 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
NUP50-216ENST00000486184 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
NUP50-216ENST00000486184 PURBQ96QR8 312 aaKnown RBP13.04□□□□□ -0.32
NUP50-216ENST00000486184 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 MCOLN1Q9GZU1 580 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 KCNJ14Q9UNX9 436 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
NUP50-216ENST00000486184 H3BQV1 296 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 INHAP05111 366 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 CYP2C19P33261 490 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 KRT2P35908 639 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 KRT40Q6A162 431 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 PHF20Q9BVI0 1012 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 ANO3Q9BYT9 981 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
NUP50-216ENST00000486184 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
NUP50-216ENST00000486184 PCDHA6Q9UN73 950 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 PCDHA8Q9Y5H6 950 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 FRMPD3Q5JV73 1810 aa13.03□□□□□ -0.32
NUP50-216ENST00000486184 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 MMP1P03956 469 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 MYCLP12524 364 aaPredicted RBP13.02□□□□□ -0.33
NUP50-216ENST00000486184 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
NUP50-216ENST00000486184 PDCP20941 246 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 CNGA1P29973 690 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 CCND2P30279 289 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 PGM5Q15124 567 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 STXBP2Q15833 593 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 MAMDC4Q6UXC1 1216 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 FGD4Q96M96 766 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 TMEM260Q9NX78 707 aa13.02□□□□□ -0.33
NUP50-216ENST00000486184 ZHX1Q9UKY1 873 aaPredicted RBP13.02□□□□□ -0.33
NUP50-216ENST00000486184 NR3C2P08235 984 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
NUP50-216ENST00000486184 GUCY1B3Q02153 619 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
NUP50-216ENST00000486184 KRT25Q7Z3Z0 450 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 PDCD2LQ9BRP1 358 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 ABHD16BQ9H3Z7 469 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 NRBP1Q9UHY1 535 aa13.01□□□□□ -0.33
NUP50-216ENST00000486184 ASTN1O14525 1302 aa13□□□□□ -0.33
NUP50-216ENST00000486184 FRMPD4Q14CM0 1322 aa13□□□□□ -0.33
NUP50-216ENST00000486184 RPTORQ8N122 1335 aa13□□□□□ -0.33
NUP50-216ENST00000486184 STAM2O75886 525 aa13□□□□□ -0.33
NUP50-216ENST00000486184 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
NUP50-216ENST00000486184 ZNF76P36508 570 aa13□□□□□ -0.33
NUP50-216ENST00000486184 CACNB2Q08289 660 aaPredicted RBP13□□□□□ -0.33
NUP50-216ENST00000486184 TRIM32Q13049 653 aa13□□□□□ -0.33
NUP50-216ENST00000486184 NONOQ15233 471 aaKnown RBP eCLIP13□□□□□ -0.33
NUP50-216ENST00000486184 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
NUP50-216ENST00000486184 PCNX4Q63HM2 1172 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms