RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TRIM4Q9C037 500 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 CEP44Q9C0F1 390 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC113Q9H0I3 377 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 RUBCNLQ9H714 662 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 TBC1D7Q9P0N9 293 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 NRBP1Q9UHY1 535 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 PRKAB1Q9Y478 270 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 ATP6V0A2Q9Y487 856 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 N6AMT1Q9Y5N5 214 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 LRPPRCP42704 1394 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 ZNF518AQ6AHZ1 1483 aa6.74□□□□□ -1.33
ECHDC1-215ENST00000475319 PAGE1O75459 146 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 MTRF1O75570 445 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 TRPA1O75762 1119 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 SLU7O95391 586 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 PARNO95453 639 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ZFXP17010 805 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 RPL13P26373 211 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 HSPA2P54652 639 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 SLMAPQ14BN4 828 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 DDR2Q16832 855 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 COL13A1Q5TAT6 717 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 CEP135Q66GS9 1140 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 CWF19L1Q69YN2 538 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 FAAH2Q6GMR7 532 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 SLC30A9Q6PML9 568 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 TRIML1Q8N9V2 468 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 USP33Q8TEY7 942 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 GIMAP1Q8WWP7 306 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ARHGAP45Q92619 1136 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 APPBP2Q92624 585 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 NACC2Q96BF6 587 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ZBTB10Q96DT7 871 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 DHTKD1Q96HY7 919 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 CDK5RAP3Q96JB5 506 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 SH3GL1Q99961 368 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 CRISPLD1Q9H336 500 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 PDRG1Q9NUG6 133 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 TONSLQ96HA7 1378 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 RAB3GAP2Q9H2M9 1393 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 LMTK3Q96Q04 1460 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC171Q6TFL3 1326 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 UHRF1BP1Q6BDS2 1440 aa6.73□□□□□ -1.33
ECHDC1-215ENST00000475319 ARHGAP5Q13017 1502 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RICTORQ6R327 1708 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 F13A1P00488 732 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RARAP10276 462 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ELNP15502 786 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RPL17P18621 184 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 OAS2P29728 719 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 NEK2P51955 445 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ZNF132P52740 706 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 EIF6P56537 245 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ST5P78524 1137 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 NSUN2Q08J23 767 aaKnown RBP eCLIP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 TMEM110Q86TL2 294 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RSPH3Q86UC2 560 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 LCA5Q86VQ0 697 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 HOMER1Q86YM7 354 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 NUP133Q8WUM0 1156 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 KCNN1Q92952 543 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 MPP4Q96JB8 637 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 GAS2L1Q99501 681 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ATP6V0A4Q9HBG4 840 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 ZFATQ9P243 1243 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 IKBKGQ9Y6K9 419 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 MTUS2Q5JR59 1369 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RPAP1Q9BWH6 1393 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 SETD1BQ9UPS6 1966 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 RTEL1-TNFRSF6BF6WH68 1400 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 KIF14Q15058 1648 aa6.72□□□□□ -1.33
ECHDC1-215ENST00000475319 SCAF11Q99590 1463 aaKnown RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 MAP3K5Q99683 1374 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 LIN7AO14910 233 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 KIF3BO15066 747 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 POLR3GO15318 223 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 PDPK1O15530 556 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ATP6V1G1O75348 118 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ZNF189O75820 626 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 EZRP15311 586 aaKnown RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 FERP16591 822 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms