RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 REXO1Q8N1G1 1221 aaKnown RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 SYTL5Q8TDW5 730 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 SH3TC2Q8TF17 1288 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 ARMC5Q96C12 935 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 TMX3Q96JJ7 454 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 ALG1Q9BT22 464 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 ZMYND12Q9H0C1 365 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 RNF208Q9H0X6 261 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 VTA1Q9NP79 307 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 RIC8AQ9NPQ8 531 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 ZHX1Q9UKY1 873 aaPredicted RBP7.31□□□□□ -1.24
SF3B1-206ENST00000462613 SMC3Q9UQE7 1217 aa7.31□□□□□ -1.24
SF3B1-206ENST00000462613 DOCK5Q9H7D0 1870 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 K7ELQ4 463 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 PPFIA3O75145 1194 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 LARGE1O95461 756 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 MYCP01106 439 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 AKR1A1P14550 325 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 TAL1P17542 331 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 CYP2C19P33261 490 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 ZNF76P36508 570 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 CAP1Q01518 475 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 CCL14Q16627 93 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 SLC35G1Q2M3R5 365 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 BRDTQ58F21 947 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 XRRA1Q6P2D8 792 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 KCNV1Q6PIU1 500 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 NSUN7Q8NE18 718 aaKnown RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 ABHD8Q96I13 439 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 ZNF333Q96JL9 665 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 CDHR1Q96JP9 859 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 C8orf76Q96K31 380 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 TAAR1Q96RJ0 339 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 PXMP2Q9NR77 195 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 VPS54Q9P1Q0 977 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 DAXXQ9UER7 740 aaPredicted RBP7.3□□□□□ -1.24
SF3B1-206ENST00000462613 FAM184BQ9ULE4 1060 aa7.3□□□□□ -1.24
SF3B1-206ENST00000462613 WDR81Q562E7 1941 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 CCDC194A0A1B0GVG4 234 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 SOWAHBA6NEL2 793 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 H3BQV1 296 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 MEIS2O14770 477 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 NKRFO15226 690 aaKnown RBP eCLIP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 SEPT4O43236 478 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 EIF3JO75822 258 aaKnown RBP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 NR3C2P08235 984 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 RARBP10826 455 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 CYBAP13498 195 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 CCL5P13501 91 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PDCP20941 246 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 KRT2P35908 639 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 CACNB2Q08289 660 aaPredicted RBP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 ACVR2BQ13705 512 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PGM5Q15124 567 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PKN1Q16512 942 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 MAP3K21Q5TCX8 1036 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 USP17L6PQ6QN14 398 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 EEPD1Q7L9B9 569 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 KRT25Q7Z3Z0 450 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 NLRX1Q86UT6 975 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 BLIDQ8IZY5 108 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 SCFD2Q8WU76 684 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 TBC1D5Q92609 795 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 SNX21Q969T3 373 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 NAP1L4Q99733 375 aaKnown RBP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 ANO3Q9BYT9 981 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.29□□□□□ -1.24
SF3B1-206ENST00000462613 FLRT1Q9NZU1 646 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 TCEAL9Q9UHQ7 104 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PCDHA6Q9UN73 950 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PCDHA4Q9UN74 947 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 PCDHA8Q9Y5H6 950 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 MRVI1Q9Y6F6 885 aa7.29□□□□□ -1.24
SF3B1-206ENST00000462613 OPLAHO14841 1288 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 ZEB2O60315 1214 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 JAK2O60674 1132 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 TFRCP02786 760 aaKnown RBP7.28□□□□□ -1.24
SF3B1-206ENST00000462613 GJB1P08034 283 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 TNFAIP2Q03169 654 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 NONOQ15233 471 aaKnown RBP eCLIP7.28□□□□□ -1.24
SF3B1-206ENST00000462613 UBE2SQ16763 222 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 CCDC144BQ3MJ40 725 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 JAKMIP3Q5VZ66 844 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 PCNX4Q63HM2 1172 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 IQSEC1Q6DN90 963 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 SEPT14Q6ZU15 432 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 ARRDC4Q8NCT1 418 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 GIMAP8Q8ND71 665 aaPredicted RBP7.28□□□□□ -1.24
SF3B1-206ENST00000462613 MORC4Q8TE76 937 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms