RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ADD3Q9UEY8 706 aaKnown RBP20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 PRR33A8MZF0 331 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 EDNRBP24530 442 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 NOVP48745 357 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 BFSP2Q13515 415 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 CLEC4DQ8WXI8 215 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 DHX38Q92620 1227 aaKnown RBP20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 STX8Q9UNK0 236 aa20.37■□□□□ 0.85
UBE2D4-209ENST00000454428 FOXP2O15409 715 aa20.36■□□□□ 0.85
UBE2D4-209ENST00000454428 ZFYP08048 801 aaPredicted RBP20.36■□□□□ 0.85
UBE2D4-209ENST00000454428 SLC16A2P36021 539 aa20.36■□□□□ 0.85
UBE2D4-209ENST00000454428 LEXMQ3ZCV2 418 aa20.36■□□□□ 0.85
UBE2D4-209ENST00000454428 MTUS1Q9ULD2 1270 aa20.36■□□□□ 0.85
UBE2D4-209ENST00000454428 USP34Q70CQ2 3546 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 NKRFO15226 690 aaKnown RBP eCLIP20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 KPNA6O60684 536 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 ARIH2O95376 493 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 IL9P15248 144 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 KCNJ6P48051 423 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 ERVK-21P61565 698 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 PPP2R5BQ15173 497 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 PTGISQ16647 500 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 LRRFIP1Q32MZ4 808 aaKnown RBP20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 GJD3Q8N144 294 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 AFAP1L1Q8TED9 768 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
UBE2D4-209ENST00000454428 PTPDC1A2A3K4 754 aa20.34■□□□□ 0.85
UBE2D4-209ENST00000454428 NBNO60934 754 aa20.34■□□□□ 0.85
UBE2D4-209ENST00000454428 GJB5O95377 273 aa20.34■□□□□ 0.85
UBE2D4-209ENST00000454428 CXCL10P02778 98 aa20.34■□□□□ 0.85
UBE2D4-209ENST00000454428 GDF6Q6KF10 455 aaPredicted RBP20.34■□□□□ 0.85
UBE2D4-209ENST00000454428 LINC01553A4QN01 128 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 CALML3P27482 149 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 RBL2Q08999 1139 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 SESTD1Q86VW0 696 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 CAGE1Q8TC20 777 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 SCFD2Q8WU76 684 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 DCAF4Q8WV16 495 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 KAT2BQ92831 832 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 NAPBQ9H115 298 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 NOD1Q9Y239 953 aa20.33■□□□□ 0.85
UBE2D4-209ENST00000454428 RAD50Q92878 1312 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 TSPY2A6NKD2 308 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 SLC3A2P08195 630 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 MS4A1P11836 297 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 SELPP16109 830 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 KCNA5P22460 613 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 RPS6P62753 249 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 PDE4DQ08499 809 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 CCDC96Q2M329 555 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 BRDTQ58F21 947 aaPredicted RBP20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 SYDE2Q5VT97 1194 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 CNKSR3Q6P9H4 555 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 TRAF7Q6Q0C0 670 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 LRRC8DQ7L1W4 858 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 TGS1Q96RS0 853 aaKnown RBP20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 RAD9AQ99638 391 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 ZBED2Q9BTP6 218 aa20.32■□□□□ 0.84
UBE2D4-209ENST00000454428 TXNP10599 105 aaKnown RBP20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 MRE11P49959 708 aa20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 CHMP4BP1P59074 171 aa20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 PPP4R3BQ5MIZ7 849 aa20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 CCDC62Q6P9F0 684 aa20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
UBE2D4-209ENST00000454428 GRXCR2A6NFK2 248 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 CKBP12277 381 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 ZMYM1Q5SVZ6 1142 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 PTCRAQ6ISU1 281 aaPredicted RBP20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 CCDC155Q8N6L0 562 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 ZNF318Q5VUA4 2279 aa20.3■□□□□ 0.84
UBE2D4-209ENST00000454428 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 MMP3P08254 477 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 NHLH1Q02575 133 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 MBTPS1Q14703 1052 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 DNERQ8NFT8 737 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 NEK9Q8TD19 979 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 WNT8BQ93098 351 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 C17orf80Q9BSJ5 609 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
UBE2D4-209ENST00000454428 KIAA1217Q5T5P2 1943 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 ABHD14A-ACY1A0A1B0GW23 586 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 MKRN4PQ13434 485 aaPredicted RBP20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 GTF2IRD1Q9UHL9 959 aa20.28■□□□□ 0.84
UBE2D4-209ENST00000454428 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 FGRP09769 529 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 ALADP13716 330 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 SSTR3P32745 418 aaPredicted RBP20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 LY6KQ17RY6 165 aa20.27■□□□□ 0.84
UBE2D4-209ENST00000454428 FAM117BQ6P1L5 589 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms