RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PHF20Q9BVI0 1012 aa18.95■□□□□ 0.62
TSPAN4-208ENST00000409531 PSTPIP2Q9H939 334 aa18.95■□□□□ 0.62
TSPAN4-208ENST00000409531 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
TSPAN4-208ENST00000409531 ZNFX1Q9P2E3 1918 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 SYT1P21579 422 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 TYW1BQ6NUM6 668 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 MAML3Q96JK9 1138 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 RIC8AQ9NPQ8 531 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 MAP3K20Q9NYL2 800 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 BRCA2P51587 3418 aa18.94■□□□□ 0.62
TSPAN4-208ENST00000409531 DNAJC25-GNG10A0A024R161 153 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 STX6O43752 255 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 TFRCP02786 760 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 MMP1P03956 469 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 CYP2C19P33261 490 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 FOSBP53539 338 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 MCTP2Q6DN12 878 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 DAGLBQ8NCG7 672 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 CRISPLD2Q9H0B8 497 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 PCDHA4Q9UN74 947 aa18.93■□□□□ 0.62
TSPAN4-208ENST00000409531 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
TSPAN4-208ENST00000409531 CLEC4DQ8WXI8 215 aa18.92■□□□□ 0.62
TSPAN4-208ENST00000409531 SHISA4Q96DD7 197 aa18.92■□□□□ 0.62
TSPAN4-208ENST00000409531 KCNJ14Q9UNX9 436 aa18.92■□□□□ 0.62
TSPAN4-208ENST00000409531 PFASO15067 1338 aa18.92■□□□□ 0.62
TSPAN4-208ENST00000409531 ZNF236Q9UL36 1845 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 VPS37CA5D8V6 355 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 GCOM1H8Y6P7 765 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 NFIBO00712 420 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 CFBP00751 764 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 TAL1P17542 331 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 CCND3P30281 292 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 KRT2P35908 639 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 GUCY1B3Q02153 619 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 GHRHRQ02643 423 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 GNL2Q13823 731 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 BLIDQ8IZY5 108 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 GJB4Q9NTQ9 266 aa18.91■□□□□ 0.62
TSPAN4-208ENST00000409531 OPLAHO14841 1288 aa18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 NSMFQ6X4W1 530 aa18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 RNF207Q6ZRF8 634 aa18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 DIS3L2Q8IYB7 885 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 TINF2Q9BSI4 451 aa18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-208ENST00000409531 FOSP01100 380 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 HSD17B4P51659 736 aa18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 AP3B2Q13367 1082 aa18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 MCTP1Q6DN14 999 aa18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 MSL3Q8N5Y2 521 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-208ENST00000409531 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 MEIS2O14770 477 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 MSCO60682 206 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 CYBAP13498 195 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 CNGA1P29973 690 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 DDIT3P35638 169 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 NUCB2P80303 420 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 NPY5RQ15761 445 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 PRAMEF19Q5SWL8 479 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 LHX8Q68G74 356 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 MAMDC4Q6UXC1 1216 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 TRPV1Q8NER1 839 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 EHMT1Q9H9B1 1298 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 CYP39A1Q9NYL5 469 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 NRBP1Q9UHY1 535 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 OGDHLQ9ULD0 1010 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 PLXNA1Q9UIW2 1896 aa18.88■□□□□ 0.61
TSPAN4-208ENST00000409531 SPDYE3A6NKU9 549 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 CLK2P49760 499 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 USP17L6PQ6QN14 398 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 KRT25Q7Z3Z0 450 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 UBE2Q1Q7Z7E8 422 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 DDX20Q9UHI6 824 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
TSPAN4-208ENST00000409531 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 BTBD18B2RXH4 712 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 M0R2N6 131 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 U2AF2P26368 475 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 HOXA13P31271 388 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 CNTN2Q02246 1040 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 BAATQ14032 418 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 UBE2SQ16763 222 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 ZSCAN16Q9H4T2 348 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
TSPAN4-208ENST00000409531 MYH7BA7E2Y1 1941 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 LCTP09848 1927 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 SEPT4O43236 478 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms