RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SALL4Q9UJQ4 1053 aa14.11□□□□□ -0.15
HERC3-203ENST00000407637 STK36Q9NRP7 1315 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 RAD51CO43502 376 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 RNF8O76064 485 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 HOXC9P31274 260 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 MXRA7P84157 204 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 CTDSPL2Q05D32 466 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 USP4Q13107 963 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 TBC1D10CQ8IV04 446 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
HERC3-203ENST00000407637 CHCHD3Q9NX63 227 aaKnown RBP14.1□□□□□ -0.15
HERC3-203ENST00000407637 DIP2CQ9Y2E4 1556 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 NEO1Q92859 1461 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 STXBP3O00186 592 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
HERC3-203ENST00000407637 ZBED6P86452 979 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 KCTD19Q17RG1 926 aaPredicted RBP14.1□□□□□ -0.15
HERC3-203ENST00000407637 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 TYW1BQ6NUM6 668 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 GALNT15Q8N3T1 639 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
HERC3-203ENST00000407637 ABCF3Q9NUQ8 709 aa14.1□□□□□ -0.15
HERC3-203ENST00000407637 AFF2P51816 1311 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 CTNND1O60716 968 aaKnown RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 FMNL1O95466 1100 aaPredicted RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 PRCPP42785 496 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 PMS1P54277 932 aaKnown RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 NEXNQ0ZGT2 675 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 RUFY4Q6ZNE9 571 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 ARHGAP22Q7Z5H3 698 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 UBAC1Q9BSL1 405 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 LRRC4CQ9HCJ2 640 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 AFDNP55196 1824 aaKnown RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 IGF2BP3O00425 579 aaKnown RBP eCLIP14.09□□□□□ -0.15
HERC3-203ENST00000407637 BUB1O43683 1085 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 NCALDP61601 193 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
HERC3-203ENST00000407637 CCDC82Q8N4S0 544 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 UBLCP1Q8WVY7 318 aaPredicted RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 EEF2KMTQ96G04 330 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 NAF1Q96HR8 494 aaKnown RBP14.09□□□□□ -0.15
HERC3-203ENST00000407637 FAM129AQ9BZQ8 928 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 SWAP70Q9UH65 585 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
HERC3-203ENST00000407637 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 FER1L4A9Z1Z3 1794 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 B4E1Z4 1266 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 SRGNP10124 158 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 ECHS1P30084 290 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 KIF11P52732 1056 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 ERMARDQ5T6L9 678 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 AGBL2Q5U5Z8 902 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 KLHDC7AQ5VTJ3 777 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 TRPM8Q7Z2W7 1104 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 KLHL7Q8IXQ5 586 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 KIF2BQ8N4N8 673 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 GORASP1Q9BQQ3 440 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 EXOC1Q9NV70 894 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 C2CD2Q9Y426 696 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 PLEKHG3A1L390 1219 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 H7C1D1 291 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 KIF5BP33176 963 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 DNM2P50570 870 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 ZNF658Q5TYW1 1059 aaPredicted RBP14.08□□□□□ -0.16
HERC3-203ENST00000407637 DDX42Q86XP3 938 aaKnown RBP eCLIP14.08□□□□□ -0.16
HERC3-203ENST00000407637 MTMR8Q96EF0 704 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 MTRQ99707 1265 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.16
HERC3-203ENST00000407637 STK38LQ9Y2H1 464 aa14.08□□□□□ -0.16
HERC3-203ENST00000407637 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.16
HERC3-203ENST00000407637 PXDNQ92626 1479 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 LRRD1A4D1F6 860 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 UBOX5O94941 541 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 KRT16P08779 473 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ITIH4Q14624 930 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 IFI16Q16666 785 aaKnown RBP14.07□□□□□ -0.16
HERC3-203ENST00000407637 CMTR1Q8N1G2 835 aaKnown RBP14.07□□□□□ -0.16
HERC3-203ENST00000407637 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ARHGAP20Q9P2F6 1191 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 FBXL5Q9UKA1 691 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 TRIM75PA6NK02 468 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 RARAP10276 462 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 MYL6BP14649 208 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 EEF1GP26641 437 aaKnown RBP14.07□□□□□ -0.16
HERC3-203ENST00000407637 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ANO7Q6IWH7 933 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 FAM81AQ8TBF8 368 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ZNF317Q96PQ6 595 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms