RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 HSP90AB2PQ58FF8 381 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 ODR4Q5SWX8 454 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 NOL8Q76FK4 1167 aaKnown RBP4□□□□□ -1.77
TRAJ40-201ENST00000390497 STRA8Q7Z7C7 330 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 C11orf74Q86VG3 221 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 SPATS2Q86XZ4 545 aaKnown RBP4□□□□□ -1.77
TRAJ40-201ENST00000390497 CREG2Q8IUH2 290 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 CCDC103Q8IW40 242 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 RCBTB1Q8NDN9 531 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 PCDH19Q8TAB3 1148 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 PI4K2BQ8TCG2 481 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 CCDC136Q96JN2 1154 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 HRASLS5Q96KN8 279 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 FOXP3Q9BZS1 431 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 LRRC4CQ9HCJ2 640 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 SEMA3GQ9NS98 782 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 AP5S1Q9NUS5 200 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 TNFRSF10DQ9UBN6 386 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 TMEFF2Q9UIK5 374 aaPredicted RBP4□□□□□ -1.77
TRAJ40-201ENST00000390497 PLAGL2Q9UPG8 496 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 ZNF281Q9Y2X9 895 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 PCDHA2Q9Y5H9 948 aa4□□□□□ -1.77
TRAJ40-201ENST00000390497 C7orf72A4D263 438 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 CBX4O00257 560 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 ARNTLO00327 626 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 GPR39O43194 453 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 ULK1O75385 1050 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 SOD2P04179 222 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 CKMP06732 381 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 BPIP17213 487 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 RPL10P27635 214 aaKnown RBP3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 EVA1CP58658 441 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 LACTBP83111 547 aaPredicted RBP3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 RASSF7Q02833 373 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 EGR3Q06889 387 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 DUSP4Q13115 394 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 STAT4Q14765 748 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 PKN3Q6P5Z2 889 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 SHISA5Q8N114 240 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 STK11IPQ8N1F8 1099 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 IGSF22Q8N9C0 903 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 FAM181AQ8N9Y4 354 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 CCDC120Q96HB5 630 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 CHAMP1Q96JM3 812 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 FCRL2Q96LA5 508 aaPredicted RBP3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 MENTQ9BUN1 341 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 TPSG1Q9NRR2 321 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 CHPF2Q9P2E5 772 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 KLHL42Q9P2K6 505 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 B4GALT6Q9UBX8 382 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 APOBEC2Q9Y235 224 aaKnown RBP3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 NUB1Q9Y5A7 615 aa3.99□□□□□ -1.77
TRAJ40-201ENST00000390497 PITPNM2Q9BZ72 1349 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 A0A1W2PQ45 241 aaPredicted RBP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 A0A1W2PQY0 241 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 M0R2C6 588 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 MSCO60682 206 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 PARNO95453 639 aaKnown RBP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 ESR1P03372 595 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 SRGAP2CP0DJJ0 459 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 GRK2P25098 689 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 GRK3P35626 688 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 GRIK1P39086 918 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 CORO7P57737 925 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 TEKQ02763 1124 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 SPIRE1Q08AE8 756 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 AOC3Q16853 763 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 INTS5Q6P9B9 1019 aaKnown RBP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 WAPLQ7Z5K2 1190 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 CPNE8Q86YQ8 564 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 SPPL2CQ8IUH8 684 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 PASD1Q8IV76 773 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 C2orf69Q8N8R5 385 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 JDP2Q8WYK2 163 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 TMEM169Q96HH4 297 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 FAM126AQ9BYI3 521 aaPredicted RBP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 CATSPERZQ9NTU4 200 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 G3BP2Q9UN86 482 aaKnown RBP3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 PCDHA11Q9Y5I1 949 aa3.98□□□□□ -1.77
TRAJ40-201ENST00000390497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 E2F8A0AVK6 867 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 TMEM82A0PJX8 343 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 CCDC66A2RUB6 948 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 WTIPA6NIX2 430 aaPredicted RBP3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 WASH4PA8MWX3 477 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 TRAF5O00463 557 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 FKBP9O95302 570 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 LCP1P13796 627 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 KIR2DL1P43626 348 aaPredicted RBP3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 KIR2DL2P43627 348 aaPredicted RBP3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 LSSP48449 732 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 DNM2P50570 870 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 KPNA1P52294 538 aaPredicted RBP3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 IL2P60568 153 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 DSG1Q02413 1049 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 ITKQ08881 620 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 LAPTM5Q13571 262 aa3.97□□□□□ -1.77
TRAJ40-201ENST00000390497 SEPT7Q16181 437 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms