RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PSMA5P28066 241 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 KIF5BP33176 963 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 PRAMEF19Q5SWL8 479 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CLEC4DQ8WXI8 215 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-202ENST00000380747 UBE2OQ9C0C9 1292 aaKnown RBP10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CYP39A1Q9NYL5 469 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 PFASO15067 1338 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 PTPDC1A2A3K4 754 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
HMGN1-202ENST00000380747 ABCB11O95342 1321 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 NUDT7P0C024 238 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 RPS6KB1P23443 525 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 CALML3P27482 149 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 GNAQP50148 359 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 BAATQ14032 418 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-202ENST00000380747 SLC35G1Q2M3R5 365 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 Q6ZUG5 572 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 SGMS1Q86VZ5 419 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 TRPV1Q8NER1 839 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 PIGSQ96S52 555 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 MAP3K14Q99558 947 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 AMNQ9BXJ7 453 aa10.71□□□□□ -0.69
HMGN1-202ENST00000380747 KLF18A0A0U1RQI7 1052 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 ZBTB5O15062 677 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 ZBTB43O43298 467 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 MAP3K7O43318 606 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 CYTH3O43739 400 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 PLEKHA8P1O95397 391 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 IGHA2P01877 340 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 CYBAP13498 195 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 SYN1P17600 705 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 HIC1Q14526 733 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 APOA5Q6Q788 366 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 RNF207Q6ZRF8 634 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 CMTR1Q8N1G2 835 aaKnown RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 MSL3Q8N5Y2 521 aaKnown RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 FAM133AQ8N9E0 248 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 BRF1Q92994 677 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 FGD4Q96M96 766 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 LZTS2Q9BRK4 669 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 RIOX1Q9H6W3 641 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 DDX20Q9UHI6 824 aaKnown RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 ZHX1Q9UKY1 873 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 CNPY2Q9Y2B0 182 aa10.7□□□□□ -0.7
HMGN1-202ENST00000380747 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
HMGN1-202ENST00000380747 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 GOLGA8AA7E2F4 631 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 GOLGA8BA8MQT2 603 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 PPP1R11O60927 126 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 FECHP22830 423 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 PTGDRQ13258 359 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 RTN1Q16799 776 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 RUFY3Q7L099 469 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 ARMCX2Q7L311 632 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 MCF2L2Q86YR7 1114 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 RRP36Q96EU6 259 aaKnown RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 SPZ1Q9BXG8 430 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 ADD3Q9UEY8 706 aaKnown RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 SEC63Q9UGP8 760 aaKnown RBP10.69□□□□□ -0.7
HMGN1-202ENST00000380747 PCDHA1Q9Y5I3 950 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
HMGN1-202ENST00000380747 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 ASB14A6NK59 587 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 TRIM66O15016 1216 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 SEPT4O43236 478 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 MSCO60682 206 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 RPS6P62753 249 aaKnown RBP10.68□□□□□ -0.7
HMGN1-202ENST00000380747 TRAF1Q13077 416 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 RGS22Q8NE09 1264 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 TBC1D5Q92609 795 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
HMGN1-202ENST00000380747 TM6SF1Q9BZW5 370 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms