RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 USP17L21D6R901 530 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 SLC4A3P48751 1232 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 HTRA4P83105 476 aaPredicted RBP18.59■□□□□ 0.57
UBXN1-201ENST00000294119 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
UBXN1-201ENST00000294119 PTPROQ16827 1216 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 FBXL6Q8N531 539 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 NYAP2Q9P242 653 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 EPG5Q9HCE0 2579 aa18.59■□□□□ 0.57
UBXN1-201ENST00000294119 CPT1AP50416 773 aa18.58■□□□□ 0.56
UBXN1-201ENST00000294119 SLC9C2Q5TAH2 1124 aa18.58■□□□□ 0.56
UBXN1-201ENST00000294119 KIFC2Q96AC6 838 aa18.58■□□□□ 0.56
UBXN1-201ENST00000294119 IRF2BPLQ9H1B7 796 aa18.58■□□□□ 0.56
UBXN1-201ENST00000294119 ZNF532Q9HCE3 1301 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 RBM47A0AV96 593 aaKnown RBP18.57■□□□□ 0.56
UBXN1-201ENST00000294119 H3BNC9 293 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 MBTPS2O43462 519 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 PRKAB2O43741 272 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 RAD21O60216 631 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 NBNO60934 754 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 PARNO95453 639 aaKnown RBP18.57■□□□□ 0.56
UBXN1-201ENST00000294119 KIAA1211Q6ZU35 1233 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 EEPD1Q7L9B9 569 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 ASCL5Q7RTU5 278 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 SUGP1Q8IWZ8 645 aaKnown RBP18.57■□□□□ 0.56
UBXN1-201ENST00000294119 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 NSUN3Q9H649 340 aaKnown RBP18.57■□□□□ 0.56
UBXN1-201ENST00000294119 INSL6Q9Y581 213 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 MICAL3Q7RTP6 2002 aa18.57■□□□□ 0.56
UBXN1-201ENST00000294119 EFCAB14O75071 495 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 MYL3P08590 195 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 NUCB1Q02818 461 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 FAM47CQ5HY64 1035 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 DHX38Q92620 1227 aaKnown RBP18.56■□□□□ 0.56
UBXN1-201ENST00000294119 SAMD11Q96NU1 681 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 HOMER2Q9NSB8 354 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 FEM1BQ9UK73 627 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 EXOC6BQ9Y2D4 811 aa18.56■□□□□ 0.56
UBXN1-201ENST00000294119 NCK2O43639 380 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 FDX1P10109 184 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 SELPP16109 830 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 VCPP55072 806 aaKnown RBP18.55■□□□□ 0.56
UBXN1-201ENST00000294119 ZXDAP98168 799 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 DLX2Q07687 328 aaPredicted RBP18.55■□□□□ 0.56
UBXN1-201ENST00000294119 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 RPAINQ86UA6 219 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 SESTD1Q86VW0 696 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 ARMT1Q9H993 441 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 RNF146Q9NTX7 359 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 CLDND1Q9NY35 253 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 ZNF292O60281 2723 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 MYH4Q9Y623 1939 aa18.55■□□□□ 0.56
UBXN1-201ENST00000294119 IGKV6D-41A0A0C4DH26 115 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 A6NJR5 290 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 SMAD4Q13485 552 aaKnown RBP18.54■□□□□ 0.56
UBXN1-201ENST00000294119 TTF1Q15361 905 aaPredicted RBP18.54■□□□□ 0.56
UBXN1-201ENST00000294119 TRAF7Q6Q0C0 670 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 LRRC8DQ7L1W4 858 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 RHPN1Q8TCX5 695 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 ATOH1Q92858 354 aaPredicted RBP18.54■□□□□ 0.56
UBXN1-201ENST00000294119 MKL1Q969V6 931 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 CYP39A1Q9NYL5 469 aa18.54■□□□□ 0.56
UBXN1-201ENST00000294119 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
UBXN1-201ENST00000294119 PRR23AA6NEV1 266 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 KPNA6O60684 536 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 NLRC5Q86WI3 1866 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 CLASRPQ8N2M8 674 aaKnown RBP18.53■□□□□ 0.56
UBXN1-201ENST00000294119 CCDC155Q8N6L0 562 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 ASIC4Q96FT7 647 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 WDR11Q9BZH6 1224 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 SYNPO2Q9UMS6 1093 aa18.53■□□□□ 0.56
UBXN1-201ENST00000294119 RALGAPA2Q2PPJ7 1873 aa18.52■□□□□ 0.56
UBXN1-201ENST00000294119 RASA1P20936 1047 aa18.52■□□□□ 0.56
UBXN1-201ENST00000294119 NUBP1P53384 320 aa18.52■□□□□ 0.56
UBXN1-201ENST00000294119 CBX2Q14781 532 aaPredicted RBP18.52■□□□□ 0.56
UBXN1-201ENST00000294119 PTGISQ16647 500 aa18.52■□□□□ 0.56
UBXN1-201ENST00000294119 FSD1Q9BTV5 496 aa18.52■□□□□ 0.56
UBXN1-201ENST00000294119 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
UBXN1-201ENST00000294119 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 LOC730098B7Z3J9 87 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 STXBP3O00186 592 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 TBX10O75333 385 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 AVPR2P30518 371 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 NBL1P41271 181 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 ID4P47928 161 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 GPM6BQ13491 265 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 IKBKEQ14164 716 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 MBTPS1Q14703 1052 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
UBXN1-201ENST00000294119 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
UBXN1-201ENST00000294119 FAM117BQ6P1L5 589 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
UBXN1-201ENST00000294119 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms