RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 COG2Q14746 738 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 GADL1Q6ZQY3 521 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 GRAMD1CQ8IYS0 662 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 BIN2Q9UBW5 565 aaPredicted RBP25.59■■□□□ 1.69
CDX1-201ENST00000231656 GOLGA6L6A8MZA4 724 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 IKBKBO14920 756 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 FDX1P10109 184 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 BMP6P22004 513 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 SPATA20Q8TB22 786 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 ATG4CQ96DT6 458 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 MRFAP1L1Q96HT8 127 aa25.59■■□□□ 1.69
CDX1-201ENST00000231656 ZNF830Q96NB3 372 aaPredicted RBP25.59■■□□□ 1.69
CDX1-201ENST00000231656 VWA5AO00534 786 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 KIF3CO14782 793 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 ICAM1P05362 532 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 TPM3P06753 285 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 DSG3P32926 999 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 LONP1P36776 959 aaKnown RBP25.58■■□□□ 1.69
CDX1-201ENST00000231656 NONOQ15233 471 aaKnown RBP eCLIP25.58■■□□□ 1.69
CDX1-201ENST00000231656 WNK4Q96J92 1243 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 GLT8D2Q9H1C3 349 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 TTC12Q9H892 705 aaPredicted RBP25.58■■□□□ 1.69
CDX1-201ENST00000231656 ADAMTS5Q9UNA0 930 aa25.58■■□□□ 1.69
CDX1-201ENST00000231656 SMTNL1A8MU46 457 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 CLK2P49760 499 aaKnown RBP25.57■■□□□ 1.68
CDX1-201ENST00000231656 E2F4Q16254 413 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 UBE2SQ16763 222 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 SMARCE1Q969G3 411 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 AGBL1Q96MI9 1066 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 TMEM60Q9H2L4 133 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 TMEM260Q9NX78 707 aa25.57■■□□□ 1.68
CDX1-201ENST00000231656 OPLAHO14841 1288 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 ZBED4O75132 1171 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 HOXA7P31268 230 aaPredicted RBP25.56■■□□□ 1.68
CDX1-201ENST00000231656 MOGSQ13724 837 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 JAKMIP3Q5VZ66 844 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 PAGE5Q96GU1 130 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 HOXC10Q9NYD6 342 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 CCPG1Q9ULG6 757 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 MYPNQ86TC9 1320 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 LAD1O00515 517 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 SNAPC2Q13487 334 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 MORC3Q14149 939 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 CPXCR1Q8N123 301 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 TRIML1Q8N9V2 468 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 CCDC34Q96HJ3 373 aa25.56■■□□□ 1.68
CDX1-201ENST00000231656 RAVER2Q9HCJ3 691 aaKnown RBP25.56■■□□□ 1.68
CDX1-201ENST00000231656 CTDP1Q9Y5B0 961 aaPredicted RBP25.56■■□□□ 1.68
CDX1-201ENST00000231656 PASKQ96RG2 1323 aa25.55■■□□□ 1.68
CDX1-201ENST00000231656 USP17L6PQ6QN14 398 aa25.55■■□□□ 1.68
CDX1-201ENST00000231656 FASTKD5Q7L8L6 764 aaKnown RBP25.55■■□□□ 1.68
CDX1-201ENST00000231656 PYM1Q9BRP8 204 aaKnown RBP25.55■■□□□ 1.68
CDX1-201ENST00000231656 AGTPBP1Q9UPW5 1226 aa25.55■■□□□ 1.68
CDX1-201ENST00000231656 ABCB11O95342 1321 aa25.55■■□□□ 1.68
CDX1-201ENST00000231656 SPDYE16A6NNV3 312 aaPredicted RBP25.54■■□□□ 1.68
CDX1-201ENST00000231656 MEIS2O14770 477 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 PRPHP41219 470 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 HSD3B7Q9H2F3 369 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 KCNF1Q9H3M0 494 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 MRPL11Q9Y3B7 192 aaKnown RBP25.54■■□□□ 1.68
CDX1-201ENST00000231656 HUNKP57058 714 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 DTHD1Q6ZMT9 781 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 NEK8Q86SG6 692 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 DRC7Q8IY82 874 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 REPS2Q8NFH8 660 aa25.54■■□□□ 1.68
CDX1-201ENST00000231656 SMC2O95347 1197 aa25.53■■□□□ 1.68
CDX1-201ENST00000231656 TPM4P67936 248 aa25.53■■□□□ 1.68
CDX1-201ENST00000231656 PDXDC2PQ6P474 469 aa25.53■■□□□ 1.68
CDX1-201ENST00000231656 IQUBQ8NA54 791 aa25.53■■□□□ 1.68
CDX1-201ENST00000231656 PTGS1P23219 599 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 MYL5Q02045 173 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 DPYDQ12882 1025 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 ORC2Q13416 577 aaPredicted RBP25.52■■□□□ 1.68
CDX1-201ENST00000231656 MLKLQ8NB16 471 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 TBCKQ8TEA7 893 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 MS4A4AQ96JQ5 239 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 NRBP1Q9UHY1 535 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 PNMA2Q9UL42 364 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 MYH7BA7E2Y1 1941 aa25.52■■□□□ 1.68
CDX1-201ENST00000231656 AFMP43652 599 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 MKRN3Q13064 507 aaKnown RBP25.51■■□□□ 1.67
CDX1-201ENST00000231656 LETM2Q2VYF4 491 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 GPAT2Q6NUI2 795 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 SMC1BQ8NDV3 1235 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 PIK3CDO00329 1044 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 ALAS1P13196 640 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 OAZ1P54368 228 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 TMEM132BQ14DG7 1078 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 SPRYD7Q5W111 196 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 CCDC186Q7Z3E2 898 aa25.51■■□□□ 1.67
CDX1-201ENST00000231656 ZNF214Q9UL59 606 aaPredicted RBP25.51■■□□□ 1.67
CDX1-201ENST00000231656 A0A0G2JMZ2 1700 aa25.5■■□□□ 1.67
CDX1-201ENST00000231656 CCNT1O60563 726 aaKnown RBP25.5■■□□□ 1.67
CDX1-201ENST00000231656 OR52Z1P0C646 297 aa25.5■■□□□ 1.67
CDX1-201ENST00000231656 ZBTB48P10074 688 aaPredicted RBP25.5■■□□□ 1.67
CDX1-201ENST00000231656 GTF2A2P52657 109 aa25.5■■□□□ 1.67
CDX1-201ENST00000231656 IRX3P78415 501 aaPredicted RBP25.5■■□□□ 1.67
CDX1-201ENST00000231656 TEX2Q8IWB9 1127 aa25.5■■□□□ 1.67
CDX1-201ENST00000231656 TBC1D5Q92609 795 aa25.5■■□□□ 1.67
CDX1-201ENST00000231656 P2RX7Q99572 595 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms