RNA–Protein interactions for RNA: snR6

snR6, Transcript of U6 spliceosomal RNA (U6 snRNA), yeast

Gene snR6, Length 112 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR6	snR6	MSB3	P48566	633 aa	Predicted RBP	0.42	□□□□□ -2.34
snR6	snR6	MET32	Q12041	191 aa		0.42	□□□□□ -2.34
snR6	snR6	TY1A-BL	Q12266	440 aa		0.42	□□□□□ -2.34
snR6	snR6	PAT1	P25644	796 aa	Known RBP	0.41	□□□□□ -2.34
snR6	snR6	YFL066C	P43538	392 aa		0.41	□□□□□ -2.34
snR6	snR6	ALO1	P54783	526 aa	Known RBP	0.41	□□□□□ -2.34
snR6	snR6	TAD3	Q9URQ3	322 aa		0.41	□□□□□ -2.34
snR6	snR6	UGA3	P26370	528 aa		0.4	□□□□□ -2.35
snR6	snR6	DRS1	P32892	752 aa	Known RBP	0.4	□□□□□ -2.35
snR6	snR6	LSB6	P42951	607 aa		0.4	□□□□□ -2.35
snR6	snR6	UBP2	Q01476	1272 aa		0.4	□□□□□ -2.35
snR6	snR6	TDA6	Q06466	467 aa		0.4	□□□□□ -2.35
snR6	snR6	PDR1	P12383	1068 aa		0.39	□□□□□ -2.35
snR6	snR6	AMN1	P38285	549 aa	Predicted RBP	0.39	□□□□□ -2.35
snR6	snR6	UBP5	P39944	805 aa		0.39	□□□□□ -2.35
snR6	snR6	PTK2	P47116	818 aa	Known RBP	0.39	□□□□□ -2.35
snR6	snR6	YML122C	Q03207	126 aa		0.39	□□□□□ -2.35
snR6	snR6	ELM1	P32801	640 aa		0.38	□□□□□ -2.35
snR6	snR6	ROG3	P43602	733 aa		0.38	□□□□□ -2.35
snR6	snR6	INP52	P50942	1183 aa		0.38	□□□□□ -2.35
snR6	snR6	YNR014W	P53719	212 aa		0.38	□□□□□ -2.35
snR6	snR6	PSH1	Q12161	406 aa		0.38	□□□□□ -2.35
snR6	snR6	YCR015C	P25616	317 aa		0.37	□□□□□ -2.35
snR6	snR6	TAT1	P38085	619 aa		0.37	□□□□□ -2.35
snR6	snR6	NUP85	P46673	744 aa		0.37	□□□□□ -2.35
snR6	snR6	BUD20	Q08004	166 aa	Predicted RBP	0.37	□□□□□ -2.35
snR6	snR6	RPP1B	P10622	106 aa	Known RBP	0.36	□□□□□ -2.35
snR6	snR6	NPL4	P33755	580 aa		0.36	□□□□□ -2.35
snR6	snR6	SLI15	P38283	698 aa		0.36	□□□□□ -2.35
snR6	snR6	PSD2	P53037	1138 aa	Known RBP	0.36	□□□□□ -2.35
snR6	snR6	NST1	P53935	1240 aa		0.36	□□□□□ -2.35
snR6	snR6	ADE12	P80210	433 aa	Known RBP	0.36	□□□□□ -2.35
snR6	snR6	TY1A-MR1	Q04215	440 aa		0.36	□□□□□ -2.35
snR6	snR6	MCA1	Q08601	432 aa		0.35	□□□□□ -2.35
snR6	snR6	MCX1	P38323	520 aa	Predicted RBP	0.34	□□□□□ -2.36
snR6	snR6	ILV3	P39522	585 aa	Known RBP	0.34	□□□□□ -2.36
snR6	snR6	LSC2	P53312	427 aa		0.34	□□□□□ -2.36
snR6	snR6	YAH1	Q12184	172 aa	Known RBP	0.34	□□□□□ -2.36
snR6	snR6	LIP5	P32875	414 aa		0.33	□□□□□ -2.36
snR6	snR6	RRN7	P40992	514 aa		0.33	□□□□□ -2.36
snR6	snR6	SBE2	P42223	864 aa	Known RBP	0.33	□□□□□ -2.36
snR6	snR6	YCK2	P23292	546 aa	Known RBP	0.32	□□□□□ -2.36
snR6	snR6	GCD11	P32481	527 aa	Known RBP	0.32	□□□□□ -2.36
snR6	snR6	MIF2	P35201	549 aa		0.32	□□□□□ -2.36
snR6	snR6	YDR215C	Q12240	137 aa		0.32	□□□□□ -2.36
snR6	snR6	GLT1	Q12680	2145 aa	Known RBP	0.32	□□□□□ -2.36
snR6	snR6	CCP1	P00431	361 aa		0.31	□□□□□ -2.36
snR6	snR6	PTC3	P34221	468 aa	Known RBP	0.31	□□□□□ -2.36
snR6	snR6	SLX1	P38324	304 aa		0.31	□□□□□ -2.36
snR6	snR6	OSH7	P38755	437 aa		0.31	□□□□□ -2.36
snR6	snR6	SOL3	P38858	249 aa		0.31	□□□□□ -2.36
snR6	snR6	CEM1	P39525	442 aa		0.31	□□□□□ -2.36
snR6	snR6	BOI2	P39969	1040 aa		0.31	□□□□□ -2.36
snR6	snR6	RTT106	P40161	455 aa		0.31	□□□□□ -2.36
snR6	snR6	PNS1	Q12412	539 aa		0.31	□□□□□ -2.36
snR6	snR6	TY1A-H	P0C2I4	478 aa	Known RBP	0.3	□□□□□ -2.36
snR6	snR6	MET1	P36150	593 aa		0.3	□□□□□ -2.36
snR6	snR6	SLN1	P39928	1220 aa	Predicted RBP	0.3	□□□□□ -2.36
snR6	snR6	STR2	P47164	639 aa		0.3	□□□□□ -2.36
snR6	snR6	PEX21	P50091	288 aa		0.3	□□□□□ -2.36
snR6	snR6	NAB2	P32505	525 aa	Known RBP RIP-Chip data	0.29	□□□□□ -2.36	not detected
snR6	snR6	PUS5	Q06244	254 aa		0.29	□□□□□ -2.36
snR6	snR6	CDC73	Q06697	393 aa		0.29	□□□□□ -2.36
snR6	snR6	ARG82	P07250	355 aa		0.28	□□□□□ -2.36
snR6	snR6	NUD1	P32336	851 aa		0.28	□□□□□ -2.36
snR6	snR6	GIP4	P39732	760 aa		0.28	□□□□□ -2.36
snR6	snR6	ISM1	P48526	1002 aa		0.28	□□□□□ -2.36
snR6	snR6	YGR130C	P53278	816 aa		0.28	□□□□□ -2.36
snR6	snR6	YGR273C	P53329	174 aa		0.28	□□□□□ -2.36
snR6	snR6	GSF2	Q04697	403 aa	Known RBP	0.28	□□□□□ -2.36
snR6	snR6	ESC8	Q08119	714 aa		0.28	□□□□□ -2.36
snR6	snR6	MED7	Q08278	222 aa		0.28	□□□□□ -2.36
snR6	snR6	TCB1	Q12466	1186 aa		0.28	□□□□□ -2.36
snR6	snR6	NOP1	P15646	327 aa	Known RBP	0.27	□□□□□ -2.37
snR6	snR6	RNQ1	P25367	405 aa		0.27	□□□□□ -2.37
snR6	snR6	SYH1	Q02875	849 aa	Known RBP	0.27	□□□□□ -2.37
snR6	snR6	YRR1	Q12172	810 aa		0.27	□□□□□ -2.37
snR6	snR6	YJR098C	P47139	656 aa		0.25	□□□□□ -2.37
snR6	snR6	PRP43	P53131	767 aa	Known RBP	0.25	□□□□□ -2.37
snR6	snR6	CUZ1	P53899	274 aa		0.25	□□□□□ -2.37
snR6	snR6	RCR1	P38212	213 aa		0.24	□□□□□ -2.37
snR6	snR6	TOS1	P38288	455 aa		0.24	□□□□□ -2.37
snR6	snR6	SAF1	P38352	637 aa		0.24	□□□□□ -2.37
snR6	snR6	NIT1	P40447	199 aa		0.24	□□□□□ -2.37
snR6	snR6	TY1A-DR4	O74302	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-A	P0CX57	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-PR1	P0CX58	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-OR	P0CX59	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-PR2	P0CX60	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-DR5	P0CX65	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-ER2	P0CX66	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-GR3	P0CX67	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-LR1	P0CX68	440 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-MR2	P0CX69	440 aa		0.23	□□□□□ -2.37
snR6	snR6	SEC2	P17065	759 aa		0.23	□□□□□ -2.37
snR6	snR6	PUB1	P32588	453 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
snR6	snR6	DLD1	P32891	587 aa		0.23	□□□□□ -2.37
snR6	snR6	AAD14	P42884	376 aa		0.23	□□□□□ -2.37
snR6	snR6	PRY1	P47032	299 aa		0.23	□□□□□ -2.37
snR6	snR6	TY1A-JR2	P47099	440 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms