RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W BNI1P41832 1953 aa7.52□□□□□ -1.21
SMF2YHR050W DNF2Q12675 1612 aa7.52□□□□□ -1.21
SMF2YHR050W SCT1P32784 759 aa7.5□□□□□ -1.21
SMF2YHR050W IPL1P38991 367 aa7.49□□□□□ -1.21
SMF2YHR050W KIP3P53086 805 aaKnown RBP7.48□□□□□ -1.21
SMF2YHR050W RSM7P47150 247 aa7.47□□□□□ -1.21
SMF2YHR050W PSD2P53037 1138 aaKnown RBP7.47□□□□□ -1.21
SMF2YHR050W NUP192P47054 1683 aa7.47□□□□□ -1.21
SMF2YHR050W TYS1P36421 394 aaKnown RBP7.47□□□□□ -1.21
SMF2YHR050W PDS5Q04264 1277 aa7.47□□□□□ -1.21
SMF2YHR050W YLR419WQ06698 1435 aaKnown RBP7.46□□□□□ -1.21
SMF2YHR050W LEU3P08638 886 aa7.46□□□□□ -1.22
SMF2YHR050W YLR271WQ06152 274 aa7.45□□□□□ -1.22
SMF2YHR050W YAP3P38749 330 aa7.43□□□□□ -1.22
SMF2YHR050W SPE2P21182 396 aa7.42□□□□□ -1.22
SMF2YHR050W SSP1P38871 571 aa7.42□□□□□ -1.22
SMF2YHR050W EPS1P40557 701 aa7.42□□□□□ -1.22
SMF2YHR050W ALD4P46367 519 aaKnown RBP7.41□□□□□ -1.22
SMF2YHR050W PRS1P32895 427 aaKnown RBP7.4□□□□□ -1.23
SMF2YHR050W BDF1P35817 686 aa7.4□□□□□ -1.23
SMF2YHR050W SLX5P32828 619 aaKnown RBP7.39□□□□□ -1.23
SMF2YHR050W TAF8Q03750 510 aa7.39□□□□□ -1.23
SMF2YHR050W NAP1P25293 417 aaKnown RBP7.38□□□□□ -1.23
SMF2YHR050W BCK1Q01389 1478 aa7.38□□□□□ -1.23
SMF2YHR050W HAP1P0CE41 1502 aa7.38□□□□□ -1.23
SMF2YHR050W MLP1Q02455 1875 aaKnown RBP7.38□□□□□ -1.23
SMF2YHR050W AI2P03876 854 aa7.38□□□□□ -1.23
SMF2YHR050W RAD9P14737 1309 aa7.38□□□□□ -1.23
SMF2YHR050W CHZ1P40019 153 aaPredicted RBP7.35□□□□□ -1.23
SMF2YHR050W CAB1Q04430 367 aa7.35□□□□□ -1.23
SMF2YHR050W NST1P53935 1240 aa7.34□□□□□ -1.23
SMF2YHR050W RTG3P38165 486 aa7.33□□□□□ -1.24
SMF2YHR050W MRX12P47084 519 aa7.32□□□□□ -1.24
SMF2YHR050W FKH1P40466 484 aa7.32□□□□□ -1.24
SMF2YHR050W BBC1P47068 1157 aa7.31□□□□□ -1.24
SMF2YHR050W DNF3Q12674 1656 aa7.31□□□□□ -1.24
SMF2YHR050W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
SMF2YHR050W KRE5P22023 1365 aa7.28□□□□□ -1.24
SMF2YHR050W RPP0P05317 312 aaKnown RBP7.27□□□□□ -1.25
SMF2YHR050W IOC4Q04213 475 aa7.27□□□□□ -1.25
SMF2YHR050W TIF4632P39936 914 aaKnown RBP7.26□□□□□ -1.25
SMF2YHR050W TGL3P40308 642 aa7.26□□□□□ -1.25
SMF2YHR050W RIA1P53893 1110 aa7.26□□□□□ -1.25
SMF2YHR050W MAK10Q02197 733 aa7.25□□□□□ -1.25
SMF2YHR050W CFT1Q06632 1357 aaKnown RBP7.24□□□□□ -1.25
SMF2YHR050W VPS27P40343 622 aaKnown RBP7.24□□□□□ -1.25
SMF2YHR050W RCM1P53972 490 aa7.24□□□□□ -1.25
SMF2YHR050W CDC45Q08032 650 aa7.24□□□□□ -1.25
SMF2YHR050W PSK1P31374 1356 aa7.23□□□□□ -1.25
SMF2YHR050W YML133CQ03099 1374 aa7.23□□□□□ -1.25
SMF2YHR050W YLL067CQ07888 1374 aa7.23□□□□□ -1.25
SMF2YHR050W YLL066CQ99208 1374 aa7.23□□□□□ -1.25
SMF2YHR050W TRK1P12685 1235 aa7.23□□□□□ -1.25
SMF2YHR050W YEF3P16521 1044 aaKnown RBP7.23□□□□□ -1.25
SMF2YHR050W ABP1P15891 592 aaKnown RBP7.22□□□□□ -1.25
SMF2YHR050W CST9Q06032 482 aa7.22□□□□□ -1.25
SMF2YHR050W PPH3P32345 308 aa7.21□□□□□ -1.26
SMF2YHR050W YDL144CQ07589 356 aa7.21□□□□□ -1.26
SMF2YHR050W DMA1P38823 416 aa7.2□□□□□ -1.26
SMF2YHR050W LEU2P04173 364 aaPredicted RBP7.19□□□□□ -1.26
SMF2YHR050W MGA2P40578 1113 aa7.19□□□□□ -1.26
SMF2YHR050W PDI1P17967 522 aaKnown RBP7.19□□□□□ -1.26
SMF2YHR050W CPS1P27614 576 aa7.19□□□□□ -1.26
SMF2YHR050W YNR029CP53729 429 aaKnown RBP7.19□□□□□ -1.26
SMF2YHR050W TAP42Q04372 366 aa7.19□□□□□ -1.26
SMF2YHR050W RVB2Q12464 471 aaKnown RBP7.19□□□□□ -1.26
SMF2YHR050W SNF2P22082 1703 aa7.18□□□□□ -1.26
SMF2YHR050W TY1B-NL2Q99337 1749 aaKnown RBP7.18□□□□□ -1.26
SMF2YHR050W KAR2P16474 682 aaKnown RBP7.18□□□□□ -1.26
SMF2YHR050W YRB30P53107 440 aaPredicted RBP7.18□□□□□ -1.26
SMF2YHR050W MTR4P47047 1073 aaKnown RBP7.17□□□□□ -1.26
SMF2YHR050W RTF1P53064 558 aa7.16□□□□□ -1.26
SMF2YHR050W MPP10P47083 593 aaKnown RBP7.16□□□□□ -1.26
SMF2YHR050W GRX4P32642 244 aa7.15□□□□□ -1.27
SMF2YHR050W FUN12P39730 1002 aaKnown RBP7.15□□□□□ -1.27
SMF2YHR050W RTR1P40084 226 aaPredicted RBP7.15□□□□□ -1.27
SMF2YHR050W USO1P25386 1790 aa7.15□□□□□ -1.27
SMF2YHR050W SUI2P20459 304 aaKnown RBP7.14□□□□□ -1.27
SMF2YHR050W RRP46P53256 223 aaPredicted RBP7.14□□□□□ -1.27
SMF2YHR050W MRM1P25270 412 aa7.13□□□□□ -1.27
SMF2YHR050W FPR3P38911 411 aaKnown RBP7.13□□□□□ -1.27
SMF2YHR050W PAP2P53632 584 aaKnown RBP7.13□□□□□ -1.27
SMF2YHR050W HIM1Q06674 414 aa7.13□□□□□ -1.27
SMF2YHR050W MIF2P35201 549 aa7.12□□□□□ -1.27
SMF2YHR050W PRD1P25375 712 aa7.11□□□□□ -1.27
SMF2YHR050W CAB3P36076 571 aa7.11□□□□□ -1.27
SMF2YHR050W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
SMF2YHR050W YMR196WQ04336 1088 aa7.11□□□□□ -1.27
SMF2YHR050W AUS1Q08409 1394 aa7.11□□□□□ -1.27
SMF2YHR050W CSE4P36012 229 aa7.1□□□□□ -1.27
SMF2YHR050W SAP155P43612 1002 aa7.1□□□□□ -1.27
SMF2YHR050W PRP43P53131 767 aaKnown RBP7.1□□□□□ -1.27
SMF2YHR050W RPS24AP0CX31 135 aaKnown RBP7.09□□□□□ -1.27
SMF2YHR050W RPS24BP0CX32 135 aaKnown RBP7.09□□□□□ -1.27
SMF2YHR050W ADE6P38972 1358 aaKnown RBP7.09□□□□□ -1.27
SMF2YHR050W TPD3P31383 635 aa7.08□□□□□ -1.28
SMF2YHR050W THI22Q06490 572 aa7.08□□□□□ -1.28
SMF2YHR050W GAS4Q08271 471 aa7.08□□□□□ -1.28
SMF2YHR050W RPO41P13433 1351 aaKnown RBP7.07□□□□□ -1.28
SMF2YHR050W RAD2P07276 1031 aa7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms