RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W YDL144CQ07589 356 aa8.57□□□□□ -1.04
RGD2YFL047W YML133CQ03099 1374 aa8.56□□□□□ -1.04
RGD2YFL047W YLL067CQ07888 1374 aa8.56□□□□□ -1.04
RGD2YFL047W YLL066CQ99208 1374 aa8.56□□□□□ -1.04
RGD2YFL047W SUI2P20459 304 aaKnown RBP8.54□□□□□ -1.04
RGD2YFL047W BNI1P41832 1953 aa8.53□□□□□ -1.04
RGD2YFL047W MIF2P35201 549 aa8.53□□□□□ -1.04
RGD2YFL047W MPP10P47083 593 aaKnown RBP8.51□□□□□ -1.05
RGD2YFL047W RRP46P53256 223 aaPredicted RBP8.51□□□□□ -1.05
RGD2YFL047W RPC31P17890 251 aa8.51□□□□□ -1.05
RGD2YFL047W NAP1P25293 417 aaKnown RBP8.5□□□□□ -1.05
RGD2YFL047W YRB30P53107 440 aaPredicted RBP8.48□□□□□ -1.05
RGD2YFL047W KRE5P22023 1365 aa8.47□□□□□ -1.05
RGD2YFL047W PPH3P32345 308 aa8.47□□□□□ -1.05
RGD2YFL047W RCM1P53972 490 aa8.47□□□□□ -1.05
RGD2YFL047W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
RGD2YFL047W RTR1P40084 226 aaPredicted RBP8.45□□□□□ -1.06
RGD2YFL047W FPR3P38911 411 aaKnown RBP8.45□□□□□ -1.06
RGD2YFL047W SAP155P43612 1002 aa8.45□□□□□ -1.06
RGD2YFL047W HAP1P0CE41 1502 aa8.44□□□□□ -1.06
RGD2YFL047W MRX12P47084 519 aa8.44□□□□□ -1.06
RGD2YFL047W PSK1P31374 1356 aa8.44□□□□□ -1.06
RGD2YFL047W OPY1P38271 328 aa8.44□□□□□ -1.06
RGD2YFL047W MLP1Q02455 1875 aaKnown RBP8.43□□□□□ -1.06
RGD2YFL047W IME2P32581 645 aa8.43□□□□□ -1.06
RGD2YFL047W HIM1Q06674 414 aa8.43□□□□□ -1.06
RGD2YFL047W RIA1P53893 1110 aa8.42□□□□□ -1.06
RGD2YFL047W THI22Q06490 572 aa8.42□□□□□ -1.06
RGD2YFL047W KAR2P16474 682 aaKnown RBP8.41□□□□□ -1.06
RGD2YFL047W PRD1P25375 712 aa8.41□□□□□ -1.06
RGD2YFL047W TAP42Q04372 366 aa8.41□□□□□ -1.06
RGD2YFL047W TPD3P31383 635 aa8.4□□□□□ -1.06
RGD2YFL047W AUS1Q08409 1394 aa8.4□□□□□ -1.07
RGD2YFL047W SNF2P22082 1703 aa8.4□□□□□ -1.07
RGD2YFL047W HEF3P53978 1044 aaKnown RBP8.39□□□□□ -1.07
RGD2YFL047W LEU2P04173 364 aaPredicted RBP8.38□□□□□ -1.07
RGD2YFL047W YIL092WP40497 633 aa8.38□□□□□ -1.07
RGD2YFL047W YFR016CP43597 1233 aaKnown RBP8.38□□□□□ -1.07
RGD2YFL047W RAD2P07276 1031 aa8.37□□□□□ -1.07
RGD2YFL047W ABP1P15891 592 aaKnown RBP8.37□□□□□ -1.07
RGD2YFL047W CPS1P27614 576 aa8.37□□□□□ -1.07
RGD2YFL047W PAP2P53632 584 aaKnown RBP8.37□□□□□ -1.07
RGD2YFL047W PDI1P17967 522 aaKnown RBP8.36□□□□□ -1.07
RGD2YFL047W DAL5P15365 543 aa8.36□□□□□ -1.07
RGD2YFL047W RTT109Q07794 436 aa8.36□□□□□ -1.07
RGD2YFL047W CSE4P36012 229 aa8.35□□□□□ -1.07
RGD2YFL047W YIR014WP40570 242 aa8.35□□□□□ -1.07
RGD2YFL047W MTR4P47047 1073 aaKnown RBP8.33□□□□□ -1.08
RGD2YFL047W POL32P47110 350 aa8.33□□□□□ -1.08
RGD2YFL047W GRX4P32642 244 aa8.33□□□□□ -1.08
RGD2YFL047W YNR029CP53729 429 aaKnown RBP8.33□□□□□ -1.08
RGD2YFL047W RTF1P53064 558 aa8.32□□□□□ -1.08
RGD2YFL047W MAK10Q02197 733 aa8.32□□□□□ -1.08
RGD2YFL047W BUD27P43573 796 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
RGD2YFL047W SIR4P11978 1358 aa8.3□□□□□ -1.08
RGD2YFL047W DNF3Q12674 1656 aa8.3□□□□□ -1.08
RGD2YFL047W RPS24AP0CX31 135 aaKnown RBP8.3□□□□□ -1.08
RGD2YFL047W RPS24BP0CX32 135 aaKnown RBP8.3□□□□□ -1.08
RGD2YFL047W PRP43P53131 767 aaKnown RBP8.29□□□□□ -1.08
RGD2YFL047W GAS4Q08271 471 aa8.29□□□□□ -1.08
RGD2YFL047W CLC1P17891 233 aa8.29□□□□□ -1.08
RGD2YFL047W YPR148CQ06523 435 aa8.28□□□□□ -1.08
RGD2YFL047W RPO41P13433 1351 aaKnown RBP8.27□□□□□ -1.09
RGD2YFL047W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
RGD2YFL047W PUF6Q04373 656 aaKnown RBP8.27□□□□□ -1.09
RGD2YFL047W ADE6P38972 1358 aaKnown RBP8.26□□□□□ -1.09
RGD2YFL047W YFR006WP43590 535 aa8.26□□□□□ -1.09
RGD2YFL047W EAF7P53911 425 aaKnown RBP8.26□□□□□ -1.09
RGD2YFL047W MAK21Q12176 1025 aaKnown RBP8.26□□□□□ -1.09
RGD2YFL047W YRF1-4O13559 1382 aa8.25□□□□□ -1.09
RGD2YFL047W DPS1P04802 557 aaKnown RBP8.24□□□□□ -1.09
RGD2YFL047W AKL1P38080 1108 aaKnown RBP8.24□□□□□ -1.09
RGD2YFL047W DSD1P53095 428 aa8.24□□□□□ -1.09
RGD2YFL047W TRP5P00931 707 aaKnown RBP8.23□□□□□ -1.09
RGD2YFL047W PCT1P13259 424 aa8.23□□□□□ -1.09
RGD2YFL047W ILV3P39522 585 aaKnown RBP8.21□□□□□ -1.09
RGD2YFL047W SNF7P39929 240 aaKnown RBP8.21□□□□□ -1.09
RGD2YFL047W RRT14P40470 206 aa8.21□□□□□ -1.09
RGD2YFL047W GYP7P48365 746 aa8.21□□□□□ -1.1
RGD2YFL047W YNL050CP53952 270 aa8.21□□□□□ -1.1
RGD2YFL047W NTH2P35172 780 aa8.2□□□□□ -1.1
RGD2YFL047W SRT1Q03175 343 aa8.19□□□□□ -1.1
RGD2YFL047W DJP1P40564 432 aa8.18□□□□□ -1.1
RGD2YFL047W ZDS1P50111 915 aaKnown RBP8.18□□□□□ -1.1
RGD2YFL047W ROX1P25042 368 aa8.18□□□□□ -1.1
RGD2YFL047W YBR287WP38355 427 aa8.16□□□□□ -1.1
RGD2YFL047W MAM1P40065 302 aa8.16□□□□□ -1.1
RGD2YFL047W CSI1Q04368 295 aa8.16□□□□□ -1.1
RGD2YFL047W TY1B-NL2Q99337 1749 aaKnown RBP8.14□□□□□ -1.11
RGD2YFL047W YPP1P46951 817 aa8.14□□□□□ -1.11
RGD2YFL047W RLF2Q12495 606 aa8.14□□□□□ -1.11
RGD2YFL047W USO1P25386 1790 aa8.14□□□□□ -1.11
RGD2YFL047W VPS24P36095 224 aaKnown RBP8.13□□□□□ -1.11
RGD2YFL047W YNG2P38806 282 aaKnown RBP8.13□□□□□ -1.11
RGD2YFL047W NKP2Q06162 153 aa8.13□□□□□ -1.11
RGD2YFL047W BMS1Q08965 1183 aaKnown RBP8.13□□□□□ -1.11
RGD2YFL047W APC1P53886 1748 aa8.12□□□□□ -1.11
RGD2YFL047W COQ4O13525 335 aa8.12□□□□□ -1.11
RGD2YFL047W HSP104P31539 908 aaKnown RBP8.12□□□□□ -1.11
RGD2YFL047W SLN1P39928 1220 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms