RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
CASC19-227ENST00000641411 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
CASC19-227ENST00000641411 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CASC19-227ENST00000641411 NLRP6P59044 892 aa14.02□□□□□ -0.17
CASC19-227ENST00000641411 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
CASC19-227ENST00000641411 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CASC19-227ENST00000641411 RIMBP2O15034 1052 aa14□□□□□ -0.17
CASC19-227ENST00000641411 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
CASC19-227ENST00000641411 PKD2Q13563 968 aa13.96□□□□□ -0.17
CASC19-227ENST00000641411 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CASC19-227ENST00000641411 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
CASC19-227ENST00000641411 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
CASC19-227ENST00000641411 ERBB3P21860 1342 aa13.94□□□□□ -0.18
CASC19-227ENST00000641411 STK25O00506 426 aa13.93□□□□□ -0.18
CASC19-227ENST00000641411 RGL2O15211 777 aa13.89□□□□□ -0.19
CASC19-227ENST00000641411 KIF3CO14782 793 aa13.88□□□□□ -0.19
CASC19-227ENST00000641411 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
CASC19-227ENST00000641411 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
CASC19-227ENST00000641411 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CASC19-227ENST00000641411 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CASC19-227ENST00000641411 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
CASC19-227ENST00000641411 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.217e-7■□□□□ 9.8
CASC19-227ENST00000641411 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CASC19-227ENST00000641411 SLC34A2O95436 690 aa13.73□□□□□ -0.21
CASC19-227ENST00000641411 PPP1R37O75864 691 aa13.69□□□□□ -0.22
CASC19-227ENST00000641411 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
CASC19-227ENST00000641411 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
CASC19-227ENST00000641411 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
CASC19-227ENST00000641411 PTGER2P43116 358 aa13.64□□□□□ -0.23
CASC19-227ENST00000641411 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
CASC19-227ENST00000641411 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CASC19-227ENST00000641411 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CASC19-227ENST00000641411 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
CASC19-227ENST00000641411 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
CASC19-227ENST00000641411 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 PBX2P40425 430 aa13.57□□□□□ -0.24
CASC19-227ENST00000641411 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CASC19-227ENST00000641411 NACADO15069 1562 aa13.55□□□□□ -0.24
CASC19-227ENST00000641411 FOXK1P85037 733 aa13.55□□□□□ -0.24
CASC19-227ENST00000641411 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CASC19-227ENST00000641411 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASC19-227ENST00000641411 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CASC19-227ENST00000641411 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
CASC19-227ENST00000641411 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CASC19-227ENST00000641411 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CASC19-227ENST00000641411 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CASC19-227ENST00000641411 ABCC9O60706 1549 aa13.43□□□□□ -0.26
CASC19-227ENST00000641411 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
CASC19-227ENST00000641411 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
CASC19-227ENST00000641411 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
CASC19-227ENST00000641411 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
CASC19-227ENST00000641411 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
CASC19-227ENST00000641411 TK2O00142 265 aa13.34□□□□□ -0.27
CASC19-227ENST00000641411 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CASC19-227ENST00000641411 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CASC19-227ENST00000641411 HRO43593 1189 aa13.32□□□□□ -0.28
CASC19-227ENST00000641411 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CASC19-227ENST00000641411 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CASC19-227ENST00000641411 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CASC19-227ENST00000641411 PSEN2P49810 448 aa13.29□□□□□ -0.28
CASC19-227ENST00000641411 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CASC19-227ENST00000641411 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CASC19-227ENST00000641411 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
CASC19-227ENST00000641411 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CASC19-227ENST00000641411 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC19-227ENST00000641411 PDE4AP27815 886 aa13.2□□□□□ -0.3
CASC19-227ENST00000641411 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
CASC19-227ENST00000641411 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
CASC19-227ENST00000641411 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
CASC19-227ENST00000641411 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CASC19-227ENST00000641411 FOSBP53539 338 aa13.17□□□□□ -0.3
CASC19-227ENST00000641411 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CASC19-227ENST00000641411 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
CASC19-227ENST00000641411 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
CASC19-227ENST00000641411 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
CASC19-227ENST00000641411 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
CASC19-227ENST00000641411 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CASC19-227ENST00000641411 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CASC19-227ENST00000641411 EVI5O60447 810 aa13.09□□□□□ -0.31
CASC19-227ENST00000641411 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
CASC19-227ENST00000641411 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
CASC19-227ENST00000641411 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
CASC19-227ENST00000641411 PTPREP23469 700 aa13.06□□□□□ -0.32
CASC19-227ENST00000641411 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CASC19-227ENST00000641411 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CASC19-227ENST00000641411 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
CASC19-227ENST00000641411 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
CASC19-227ENST00000641411 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
CASC19-227ENST00000641411 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
CASC19-227ENST00000641411 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CASC19-227ENST00000641411 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
CASC19-227ENST00000641411 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms