RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
PHGDH-215ENST00000641371 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
PHGDH-215ENST00000641371 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
PHGDH-215ENST00000641371 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
PHGDH-215ENST00000641371 DAPK1P53355 1430 aa14.35□□□□□ -0.11
PHGDH-215ENST00000641371 ARAP3Q8WWN8 1544 aa14.35□□□□□ -0.11
PHGDH-215ENST00000641371 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
PHGDH-215ENST00000641371 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
PHGDH-215ENST00000641371 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
PHGDH-215ENST00000641371 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.11
PHGDH-215ENST00000641371 NAIPQ13075 1403 aa14.32□□□□□ -0.12
PHGDH-215ENST00000641371 ABCC5O15440 1437 aa14.32□□□□□ -0.12
PHGDH-215ENST00000641371 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
PHGDH-215ENST00000641371 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
PHGDH-215ENST00000641371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.126e-6■■■■■ 38.2
PHGDH-215ENST00000641371 PTPRKQ15262 1439 aa14.31□□□□□ -0.12
PHGDH-215ENST00000641371 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
PHGDH-215ENST00000641371 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
PHGDH-215ENST00000641371 KIAA1107Q9UPP5 1409 aa14.29□□□□□ -0.12
PHGDH-215ENST00000641371 TTC37Q6PGP7 1564 aa14.28□□□□□ -0.12
PHGDH-215ENST00000641371 ARHGAP5Q13017 1502 aa14.27□□□□□ -0.12
PHGDH-215ENST00000641371 PLCH2O75038 1416 aa14.27□□□□□ -0.12
PHGDH-215ENST00000641371 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.12
PHGDH-215ENST00000641371 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
PHGDH-215ENST00000641371 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
PHGDH-215ENST00000641371 SAMD9LQ8IVG5 1584 aa14.25□□□□□ -0.13
PHGDH-215ENST00000641371 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
PHGDH-215ENST00000641371 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
PHGDH-215ENST00000641371 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
PHGDH-215ENST00000641371 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
PHGDH-215ENST00000641371 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
PHGDH-215ENST00000641371 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-215ENST00000641371 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
PHGDH-215ENST00000641371 MBD5Q9P267 1494 aa14.22□□□□□ -0.13
PHGDH-215ENST00000641371 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
PHGDH-215ENST00000641371 ASXL2Q76L83 1435 aa14.22□□□□□ -0.13
PHGDH-215ENST00000641371 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
PHGDH-215ENST00000641371 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-215ENST00000641371 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
PHGDH-215ENST00000641371 ABCC1P33527 1531 aa14.19□□□□□ -0.14
PHGDH-215ENST00000641371 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 CHIC2Q9UKJ5 165 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 SYCP2Q9BX26 1530 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
PHGDH-215ENST00000641371 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
PHGDH-215ENST00000641371 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
PHGDH-215ENST00000641371 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
PHGDH-215ENST00000641371 FANCAO15360 1455 aa14.13□□□□□ -0.15
PHGDH-215ENST00000641371 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
PHGDH-215ENST00000641371 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
PHGDH-215ENST00000641371 HNRNPMP52272 730 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■■■□ 22.8
PHGDH-215ENST00000641371 DUOX2Q9NRD8 1548 aa14.11□□□□□ -0.15
PHGDH-215ENST00000641371 GLI2P10070 1586 aa14.11□□□□□ -0.15
PHGDH-215ENST00000641371 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
PHGDH-215ENST00000641371 KDM6BO15054 1643 aa14.1□□□□□ -0.15
PHGDH-215ENST00000641371 ERBINQ96RT1 1412 aa14.09□□□□□ -0.15
PHGDH-215ENST00000641371 CD109Q6YHK3 1445 aa14.08□□□□□ -0.15
PHGDH-215ENST00000641371 NEO1Q92859 1461 aa14.08□□□□□ -0.16
PHGDH-215ENST00000641371 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
PHGDH-215ENST00000641371 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
PHGDH-215ENST00000641371 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
PHGDH-215ENST00000641371 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
PHGDH-215ENST00000641371 UNC13BO14795 1591 aa14.05□□□□□ -0.16
PHGDH-215ENST00000641371 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
PHGDH-215ENST00000641371 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-215ENST00000641371 CYB5RLQ6IPT4 315 aa14.04□□□□□ -0.16
PHGDH-215ENST00000641371 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
PHGDH-215ENST00000641371 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
PHGDH-215ENST00000641371 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
PHGDH-215ENST00000641371 MAP3K4Q9Y6R4 1608 aa14.04□□□□□ -0.16
PHGDH-215ENST00000641371 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
PHGDH-215ENST00000641371 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
PHGDH-215ENST00000641371 PZPP20742 1482 aa14.03□□□□□ -0.16
PHGDH-215ENST00000641371 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
PHGDH-215ENST00000641371 ATP7AQ04656 1500 aa14.02□□□□□ -0.16
PHGDH-215ENST00000641371 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
PHGDH-215ENST00000641371 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-215ENST00000641371 DENND4BO75064 1496 aaPredicted RBP14□□□□□ -0.17
PHGDH-215ENST00000641371 NUP155O75694 1391 aa14□□□□□ -0.17
PHGDH-215ENST00000641371 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
PHGDH-215ENST00000641371 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
PHGDH-215ENST00000641371 KDM5CP41229 1560 aa14□□□□□ -0.17
PHGDH-215ENST00000641371 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
PHGDH-215ENST00000641371 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
PHGDH-215ENST00000641371 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
PHGDH-215ENST00000641371 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
PHGDH-215ENST00000641371 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
PHGDH-215ENST00000641371 FAM135AQ9P2D6 1515 aa13.97□□□□□ -0.17
PHGDH-215ENST00000641371 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
PHGDH-215ENST00000641371 HECW2Q9P2P5 1572 aa13.96□□□□□ -0.17
PHGDH-215ENST00000641371 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.17
PHGDH-215ENST00000641371 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
PHGDH-215ENST00000641371 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-215ENST00000641371 KANK1Q14678 1352 aa13.94□□□□□ -0.18
PHGDH-215ENST00000641371 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
PHGDH-215ENST00000641371 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
PHGDH-215ENST00000641371 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms