RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 DOK7Q18PE1 504 aa15.46■□□□□ 0.07
RFC1-217ENST00000639695 FBXO22Q8NEZ5 403 aa15.46■□□□□ 0.07
RFC1-217ENST00000639695 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
RFC1-217ENST00000639695 MFRPQ9BY79 579 aa15.4■□□□□ 0.06
RFC1-217ENST00000639695 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
RFC1-217ENST00000639695 PKD2Q13563 968 aa15.39■□□□□ 0.05
RFC1-217ENST00000639695 NLRP6P59044 892 aa15.38■□□□□ 0.05
RFC1-217ENST00000639695 RGL2O15211 777 aa15.37■□□□□ 0.05
RFC1-217ENST00000639695 ERBB3P21860 1342 aa15.37■□□□□ 0.05
RFC1-217ENST00000639695 STK25O00506 426 aa15.36■□□□□ 0.05
RFC1-217ENST00000639695 GPR153Q6NV75 609 aa15.33■□□□□ 0.04
RFC1-217ENST00000639695 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
RFC1-217ENST00000639695 VARS2Q5ST30 1063 aaKnown RBP15.32■□□□□ 0.04
RFC1-217ENST00000639695 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
RFC1-217ENST00000639695 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
RFC1-217ENST00000639695 KHSRPQ92945 711 aaKnown RBP eCLIP15.27■□□□□ 0.04
RFC1-217ENST00000639695 ARSIQ5FYB1 569 aa15.26■□□□□ 0.03
RFC1-217ENST00000639695 KIF3CO14782 793 aa15.23■□□□□ 0.03
RFC1-217ENST00000639695 C2orf72A6NCS6 295 aa15.21■□□□□ 0.03
RFC1-217ENST00000639695 PPP1R37O75864 691 aa15.17■□□□□ 0.02
RFC1-217ENST00000639695 ZNF687Q8N1G0 1237 aa15.17■□□□□ 0.02
RFC1-217ENST00000639695 ZNF316A6NFI3 1004 aaPredicted RBP15.1■□□□□ 0.01
RFC1-217ENST00000639695 NUDT7P0C024 238 aa15.06■□□□□ 0
RFC1-217ENST00000639695 RNF166Q96A37 237 aaPredicted RBP15.03■□□□□ -0
RFC1-217ENST00000639695 PCDHGA4Q9Y5G9 962 aa15.02■□□□□ -0
RFC1-217ENST00000639695 TMC2Q8TDI7 906 aa15.01□□□□□ -0.01
RFC1-217ENST00000639695 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
RFC1-217ENST00000639695 SLC34A2O95436 690 aa14.99□□□□□ -0.01
RFC1-217ENST00000639695 LHX6Q9UPM6 363 aa14.99□□□□□ -0.01
RFC1-217ENST00000639695 POTEEQ6S8J3 1075 aa14.98□□□□□ -0.01
RFC1-217ENST00000639695 ANKRD13DQ6ZTN6 518 aa14.98□□□□□ -0.01
RFC1-217ENST00000639695 HS6ST3Q8IZP7 471 aa14.97□□□□□ -0.01
RFC1-217ENST00000639695 LSM11P83369 360 aaKnown RBP eCLIP14.93□□□□□ -0.02
RFC1-217ENST00000639695 AXIN2Q9Y2T1 843 aa14.92□□□□□ -0.02
RFC1-217ENST00000639695 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
RFC1-217ENST00000639695 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
RFC1-217ENST00000639695 NKX1-1Q15270 411 aaPredicted RBP14.88□□□□□ -0.03
RFC1-217ENST00000639695 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
RFC1-217ENST00000639695 FOXK1P85037 733 aa14.84□□□□□ -0.03
RFC1-217ENST00000639695 DSG2Q14126 1118 aa14.84□□□□□ -0.03
RFC1-217ENST00000639695 PTGER2P43116 358 aa14.83□□□□□ -0.04
RFC1-217ENST00000639695 PTCD2Q8WV60 388 aaKnown RBP14.83□□□□□ -0.04
RFC1-217ENST00000639695 PBX2P40425 430 aa14.82□□□□□ -0.04
RFC1-217ENST00000639695 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
RFC1-217ENST00000639695 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
RFC1-217ENST00000639695 ARHGAP33O14559 1287 aa14.72□□□□□ -0.05
RFC1-217ENST00000639695 PSEN2P49810 448 aa14.72□□□□□ -0.05
RFC1-217ENST00000639695 DMRTA1Q5VZB9 504 aa14.72□□□□□ -0.05
RFC1-217ENST00000639695 ADGRD1Q6QNK2 874 aa14.7□□□□□ -0.06
RFC1-217ENST00000639695 PSDA5PKW4 1024 aaPredicted RBP14.68□□□□□ -0.06
RFC1-217ENST00000639695 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
RFC1-217ENST00000639695 OXER1Q8TDS5 423 aa14.65□□□□□ -0.06
RFC1-217ENST00000639695 UPF1Q92900 1129 aaKnown RBP eCLIP14.65□□□□□ -0.06
RFC1-217ENST00000639695 NCKAP5LQ9HCH0 1330 aa14.64□□□□□ -0.07
RFC1-217ENST00000639695 HRO43593 1189 aa14.62□□□□□ -0.07
RFC1-217ENST00000639695 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
RFC1-217ENST00000639695 TBC1D12O60347 775 aa14.61□□□□□ -0.07
RFC1-217ENST00000639695 PPP1R15BQ5SWA1 713 aa14.6□□□□□ -0.07
RFC1-217ENST00000639695 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
RFC1-217ENST00000639695 TK2O00142 265 aa14.58□□□□□ -0.08
RFC1-217ENST00000639695 KCNK17Q96T54 332 aa14.57□□□□□ -0.08
RFC1-217ENST00000639695 RYDENQ9NUL5 291 aaKnown RBP14.55□□□□□ -0.08
RFC1-217ENST00000639695 ZNF454Q8N9F8 522 aa14.51□□□□□ -0.09
RFC1-217ENST00000639695 HCSTQ9UBK5 93 aa14.51□□□□□ -0.09
RFC1-217ENST00000639695 PDE4AP27815 886 aa14.48□□□□□ -0.09
RFC1-217ENST00000639695 PLA2G2EQ9NZK7 142 aa14.48□□□□□ -0.09
RFC1-217ENST00000639695 FOSBP53539 338 aa14.47□□□□□ -0.09
RFC1-217ENST00000639695 KCTD12Q96CX2 325 aaKnown RBP14.47□□□□□ -0.09
RFC1-217ENST00000639695 LARP6Q9BRS8 491 aaKnown RBP14.47□□□□□ -0.09
RFC1-217ENST00000639695 VPS9D1Q9Y2B5 631 aa14.47□□□□□ -0.09
RFC1-217ENST00000639695 BCL2L12Q9HB09 334 aa14.45□□□□□ -0.1
RFC1-217ENST00000639695 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
RFC1-217ENST00000639695 EVI5O60447 810 aa14.43□□□□□ -0.1
RFC1-217ENST00000639695 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
RFC1-217ENST00000639695 MFSD10Q14728 455 aa14.41□□□□□ -0.1
RFC1-217ENST00000639695 DDX27Q96GQ7 796 aaKnown RBP14.41□□□□□ -0.1
RFC1-217ENST00000639695 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
RFC1-217ENST00000639695 EMILIN3Q9NT22 766 aa14.4□□□□□ -0.1
RFC1-217ENST00000639695 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
RFC1-217ENST00000639695 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
RFC1-217ENST00000639695 ADAM33Q9BZ11 813 aa14.38□□□□□ -0.11
RFC1-217ENST00000639695 STAC3Q96MF2 364 aa14.36□□□□□ -0.11
RFC1-217ENST00000639695 ZBED2Q9BTP6 218 aa14.36□□□□□ -0.11
RFC1-217ENST00000639695 SLC4A5Q9BY07 1137 aa14.36□□□□□ -0.11
RFC1-217ENST00000639695 BHMG1C9JSJ3 638 aaPredicted RBP14.35□□□□□ -0.11
RFC1-217ENST00000639695 PTPREP23469 700 aa14.35□□□□□ -0.11
RFC1-217ENST00000639695 PLCB2Q00722 1185 aa14.33□□□□□ -0.12
RFC1-217ENST00000639695 ZDHHC16Q969W1 377 aa14.33□□□□□ -0.12
RFC1-217ENST00000639695 MAP3K9P80192 1104 aa14.32□□□□□ -0.12
RFC1-217ENST00000639695 PTPN5P54829 565 aa14.31□□□□□ -0.12
RFC1-217ENST00000639695 PCDHGA10Q9Y5H3 936 aa14.28□□□□□ -0.12
RFC1-217ENST00000639695 THSD4Q6ZMP0 1018 aa14.25□□□□□ -0.13
RFC1-217ENST00000639695 COL9A1P20849 921 aa14.24□□□□□ -0.13
RFC1-217ENST00000639695 PROX2Q3B8N5 592 aa14.22□□□□□ -0.13
RFC1-217ENST00000639695 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
RFC1-217ENST00000639695 WNT2BQ93097 391 aa14.21□□□□□ -0.13
RFC1-217ENST00000639695 PPP1R3GB7ZBB8 358 aa14.18□□□□□ -0.14
RFC1-217ENST00000639695 GOLGA8CPA6NN73 597 aa14.17□□□□□ -0.14
RFC1-217ENST00000639695 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
RFC1-217ENST00000639695 CAMK2BQ13554 666 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms