RNA–Protein interactions for RNA: ENST00000639689.1

GCSH-209, Transcript of glycine cleavage system protein H, humanhuman

TSL 5 BASIC

Gene GCSH, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-209ENST00000639689 CHIC2Q9UKJ5 165 aa25.48■■□□□ 1.67
GCSH-209ENST00000639689 PLEKHD1A6NEE1 506 aa25.47■■□□□ 1.67
GCSH-209ENST00000639689 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
GCSH-209ENST00000639689 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
GCSH-209ENST00000639689 CFDP1Q9UEE9 299 aaPredicted RBP25.43■■□□□ 1.66
GCSH-209ENST00000639689 TIMELESSQ9UNS1 1208 aa25.43■■□□□ 1.66
GCSH-209ENST00000639689 CROCC2H7BZ55 1655 aa25.42■■□□□ 1.66
GCSH-209ENST00000639689 ABCC2Q92887 1545 aa25.4■■□□□ 1.66
GCSH-209ENST00000639689 DENND4BO75064 1496 aaPredicted RBP25.4■■□□□ 1.66
GCSH-209ENST00000639689 ADGBQ8N7X0 1667 aa25.39■■□□□ 1.65
GCSH-209ENST00000639689 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
GCSH-209ENST00000639689 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
GCSH-209ENST00000639689 CDC42BPBQ9Y5S2 1711 aa25.31■■□□□ 1.64
GCSH-209ENST00000639689 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
GCSH-209ENST00000639689 NCOA1Q15788 1441 aa25.3■■□□□ 1.64
GCSH-209ENST00000639689 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
GCSH-209ENST00000639689 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
GCSH-209ENST00000639689 SHANK2Q9UPX8 1470 aa25.27■■□□□ 1.64
GCSH-209ENST00000639689 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
GCSH-209ENST00000639689 PPP1R15AO75807 674 aaPredicted RBP25.26■■□□□ 1.63
GCSH-209ENST00000639689 ARHGEF5Q12774 1597 aa25.25■■□□□ 1.63
GCSH-209ENST00000639689 ZCCHC11Q5TAX3 1644 aaKnown RBP25.24■■□□□ 1.63
GCSH-209ENST00000639689 TTC37Q6PGP7 1564 aa25.24■■□□□ 1.63
GCSH-209ENST00000639689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.23■■□□□ 1.63
GCSH-209ENST00000639689 KDM5BQ9UGL1 1544 aa25.23■■□□□ 1.63
GCSH-209ENST00000639689 SAMD9LQ8IVG5 1584 aa25.23■■□□□ 1.63
GCSH-209ENST00000639689 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
GCSH-209ENST00000639689 MPHOSPH9Q99550 1183 aa25.23■■□□□ 1.63
GCSH-209ENST00000639689 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
GCSH-209ENST00000639689 TONSLQ96HA7 1378 aa25.2■■□□□ 1.62
GCSH-209ENST00000639689 ANKRD30AQ9BXX3 1397 aa25.19■■□□□ 1.62
GCSH-209ENST00000639689 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
GCSH-209ENST00000639689 MYO5CQ9NQX4 1742 aa25.17■■□□□ 1.62
GCSH-209ENST00000639689 PZPP20742 1482 aa25.15■■□□□ 1.62
GCSH-209ENST00000639689 MIER1Q8N108 512 aa25.14■■□□□ 1.62
GCSH-209ENST00000639689 ANKRD30BQ9BXX2 1392 aa25.12■■□□□ 1.61
GCSH-209ENST00000639689 CCDC141Q6ZP82 1450 aa25.11■■□□□ 1.61
GCSH-209ENST00000639689 ANKRD50Q9ULJ7 1429 aa25.11■■□□□ 1.61
GCSH-209ENST00000639689 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
GCSH-209ENST00000639689 HNRNPMP52272 730 aaKnown RBP eCLIP25.1■■□□□ 1.61
GCSH-209ENST00000639689 SYCP2Q9BX26 1530 aa25.07■■□□□ 1.6
GCSH-209ENST00000639689 MAST1Q9Y2H9 1570 aa25.07■■□□□ 1.6
GCSH-209ENST00000639689 RSPH4AQ5TD94 716 aa25.06■■□□□ 1.6
GCSH-209ENST00000639689 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
GCSH-209ENST00000639689 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
GCSH-209ENST00000639689 FOXD1Q16676 465 aa25.05■■□□□ 1.6
GCSH-209ENST00000639689 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
GCSH-209ENST00000639689 KIAA1107Q9UPP5 1409 aa25.05■■□□□ 1.6
GCSH-209ENST00000639689 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
GCSH-209ENST00000639689 PLCH2O75038 1416 aa25.04■■□□□ 1.6
GCSH-209ENST00000639689 KDM5DQ9BY66 1539 aa25.03■■□□□ 1.6
GCSH-209ENST00000639689 PLEKHH2Q8IVE3 1493 aa25.03■■□□□ 1.6
GCSH-209ENST00000639689 KIF15Q9NS87 1388 aa25.02■■□□□ 1.6
GCSH-209ENST00000639689 KCNH8Q96L42 1107 aa25■■□□□ 1.59
GCSH-209ENST00000639689 ARHGEF12Q9NZN5 1544 aa24.98■■□□□ 1.59
GCSH-209ENST00000639689 TEX14Q8IWB6 1497 aa24.98■■□□□ 1.59
GCSH-209ENST00000639689 ARAP3Q8WWN8 1544 aa24.98■■□□□ 1.59
GCSH-209ENST00000639689 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
GCSH-209ENST00000639689 PLXNC1O60486 1568 aa24.96■■□□□ 1.59
GCSH-209ENST00000639689 WDR7Q9Y4E6 1490 aa24.95■■□□□ 1.58
GCSH-209ENST00000639689 ABCC1P33527 1531 aa24.95■■□□□ 1.58
GCSH-209ENST00000639689 L3MBTL2Q969R5 705 aa24.93■■□□□ 1.58
GCSH-209ENST00000639689 NUP155O75694 1391 aa24.91■■□□□ 1.58
GCSH-209ENST00000639689 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
GCSH-209ENST00000639689 EFCAB2Q5VUJ9 269 aa24.9■■□□□ 1.58
GCSH-209ENST00000639689 PKD2Q13563 968 aa24.89■■□□□ 1.58
GCSH-209ENST00000639689 UNC13BO14795 1591 aa24.88■■□□□ 1.57
GCSH-209ENST00000639689 HIRIP3Q9BW71 556 aaPredicted RBP24.85■■□□□ 1.57
GCSH-209ENST00000639689 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
GCSH-209ENST00000639689 TRAPPC8Q9Y2L5 1435 aa24.83■■□□□ 1.57
GCSH-209ENST00000639689 DUOX2Q9NRD8 1548 aa24.83■■□□□ 1.57
GCSH-209ENST00000639689 ASXL2Q76L83 1435 aa24.82■■□□□ 1.56
GCSH-209ENST00000639689 CENPBP07199 599 aaPredicted RBP24.82■■□□□ 1.56
GCSH-209ENST00000639689 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
GCSH-209ENST00000639689 NBPF8Q3BBV2 869 aa24.78■■□□□ 1.56
GCSH-209ENST00000639689 MAGI2Q86UL8 1455 aa24.78■■□□□ 1.56
GCSH-209ENST00000639689 IQGAP3Q86VI3 1631 aa24.78■■□□□ 1.56
GCSH-209ENST00000639689 ERBINQ96RT1 1412 aa24.77■■□□□ 1.56
GCSH-209ENST00000639689 RTEL1-TNFRSF6BF6WH68 1400 aa24.75■■□□□ 1.55
GCSH-209ENST00000639689 FANCAO15360 1455 aa24.75■■□□□ 1.55
GCSH-209ENST00000639689 ZFYVE16Q7Z3T8 1539 aa24.75■■□□□ 1.55
GCSH-209ENST00000639689 HSPA5P11021 654 aaKnown RBP24.73■■□□□ 1.55
GCSH-209ENST00000639689 YTHDC1Q96MU7 727 aaKnown RBP24.72■■□□□ 1.55
GCSH-209ENST00000639689 INO80Q9ULG1 1556 aaPredicted RBP24.7■■□□□ 1.55
GCSH-209ENST00000639689 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
GCSH-209ENST00000639689 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.54
GCSH-209ENST00000639689 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
GCSH-209ENST00000639689 SPAG9O60271 1321 aaKnown RBP24.67■■□□□ 1.54
GCSH-209ENST00000639689 UHRF1BP1Q6BDS2 1440 aa24.67■■□□□ 1.54
GCSH-209ENST00000639689 AFAP1Q8N556 730 aa24.67■■□□□ 1.54
GCSH-209ENST00000639689 PLA2R1Q13018 1463 aa24.66■■□□□ 1.54
GCSH-209ENST00000639689 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
GCSH-209ENST00000639689 ATP7AQ04656 1500 aa24.65■■□□□ 1.54
GCSH-209ENST00000639689 NPM1P06748 294 aaKnown RBP eCLIP24.63■■□□□ 1.53
GCSH-209ENST00000639689 DEPDC5O75140 1603 aa24.63■■□□□ 1.53
GCSH-209ENST00000639689 WASHC2AQ641Q2 1341 aa24.62■■□□□ 1.53
GCSH-209ENST00000639689 SCAPERQ9BY12 1400 aa24.62■■□□□ 1.53
GCSH-209ENST00000639689 POLR1AO95602 1720 aaPredicted RBP24.61■■□□□ 1.53
GCSH-209ENST00000639689 ATP10AO60312 1499 aa24.61■■□□□ 1.53
GCSH-209ENST00000639689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms