RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GGT6Q6P531 493 aa22.86■■□□□ 1.25
CACNA1A-227ENST00000636549 TAF7LQ5H9L4 462 aa22.85■■□□□ 1.25
CACNA1A-227ENST00000636549 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 CFDP1Q9UEE9 299 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 GORABQ5T7V8 394 aa22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 SAMD1Q6SPF0 538 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-227ENST00000636549 FBXW7Q969H0 707 aa22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 FRAT2O75474 233 aaPredicted RBP22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 A0A0U1RQG5 324 aaPredicted RBP22.82■■□□□ 1.24
CACNA1A-227ENST00000636549 CNKSR2Q8WXI2 1034 aa22.81■■□□□ 1.24
CACNA1A-227ENST00000636549 TOMM22Q9NS69 142 aa22.8■■□□□ 1.24
CACNA1A-227ENST00000636549 RASSF8Q8NHQ8 419 aa22.79■■□□□ 1.24
CACNA1A-227ENST00000636549 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
CACNA1A-227ENST00000636549 FOXD4L1Q9NU39 408 aa22.78■■□□□ 1.24
CACNA1A-227ENST00000636549 MEX3CQ5U5Q3 659 aaKnown RBP22.77■■□□□ 1.24
CACNA1A-227ENST00000636549 GZF1Q9H116 711 aaPredicted RBP22.75■■□□□ 1.23
CACNA1A-227ENST00000636549 GTF2E1P29083 439 aaPredicted RBP22.75■■□□□ 1.23
CACNA1A-227ENST00000636549 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-227ENST00000636549 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-227ENST00000636549 DCAF11Q8TEB1 546 aa22.72■■□□□ 1.23
CACNA1A-227ENST00000636549 NGEFQ8N5V2 710 aa22.72■■□□□ 1.23
CACNA1A-227ENST00000636549 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 MARCH6O60337 910 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 SIN3AQ96ST3 1273 aa22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 L1TD1Q5T7N2 865 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-227ENST00000636549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.7■■□□□ 1.22
CACNA1A-227ENST00000636549 PATL2C9JE40 543 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-227ENST00000636549 NRDCO43847 1150 aa22.69■■□□□ 1.22
CACNA1A-227ENST00000636549 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 PES1O00541 588 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 MCCP23508 829 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-227ENST00000636549 KIAA1211Q6ZU35 1233 aa22.67■■□□□ 1.22
CACNA1A-227ENST00000636549 TRIM6-TRIM34B2RNG4 842 aa22.66■■□□□ 1.22
CACNA1A-227ENST00000636549 CHAF1AQ13111 956 aaPredicted RBP22.65■■□□□ 1.22
CACNA1A-227ENST00000636549 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD1Q16676 465 aa22.63■■□□□ 1.21
CACNA1A-227ENST00000636549 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 CWC22Q9HCG8 908 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 MSNP26038 577 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 ITPRIPQ8IWB1 547 aa22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
CACNA1A-227ENST00000636549 PPP1R1BQ9UD71 204 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 EVA1CP58658 441 aa22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-227ENST00000636549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
CACNA1A-227ENST00000636549 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-227ENST00000636549 TCEAL9Q9UHQ7 104 aa22.52■■□□□ 1.2
CACNA1A-227ENST00000636549 CLIP1P30622 1438 aa22.52■■□□□ 1.2
CACNA1A-227ENST00000636549 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
CACNA1A-227ENST00000636549 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-227ENST00000636549 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 CEP89Q96ST8 783 aa22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 HDGFL2Q7Z4V5 671 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 SLKQ9H2G2 1235 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
CACNA1A-227ENST00000636549 TMF1P82094 1093 aa22.49■■□□□ 1.19
CACNA1A-227ENST00000636549 NGDNQ8NEJ9 315 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-227ENST00000636549 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
CACNA1A-227ENST00000636549 KDM4AO75164 1064 aa22.48■■□□□ 1.19
CACNA1A-227ENST00000636549 MFAP1P55081 439 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-227ENST00000636549 KANK1Q14678 1352 aa22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 BCL11BQ9C0K0 894 aaPredicted RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-227ENST00000636549 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
CACNA1A-227ENST00000636549 AMPHP49418 695 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 FOSBP53539 338 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 CLUAP1Q96AJ1 413 aa22.42■■□□□ 1.18
CACNA1A-227ENST00000636549 SLC4A3P48751 1232 aa22.41■■□□□ 1.18
CACNA1A-227ENST00000636549 DHX16O60231 1041 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-227ENST00000636549 CHMP4BQ9H444 224 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-227ENST00000636549 FYB1O15117 783 aa22.39■■□□□ 1.17
CACNA1A-227ENST00000636549 TPD52L1Q16890 204 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-227ENST00000636549 CCAR2Q8N163 923 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-227ENST00000636549 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
CACNA1A-227ENST00000636549 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 ELL2O00472 640 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 MS4A1P11836 297 aa22.36■■□□□ 1.17
CACNA1A-227ENST00000636549 GPATCH3Q96I76 525 aa22.35■■□□□ 1.17
CACNA1A-227ENST00000636549 IBSPP21815 317 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-227ENST00000636549 TPM4P67936 248 aa22.34■■□□□ 1.17
CACNA1A-227ENST00000636549 RILPL2Q969X0 211 aa22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 SPAG9O60271 1321 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-227ENST00000636549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.31■■□□□ 1.167e-11■■■■■ 260.8
CACNA1A-227ENST00000636549 PCMTD1Q96MG8 357 aaPredicted RBP22.31■■□□□ 1.16
CACNA1A-227ENST00000636549 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-227ENST00000636549 SF3A1Q15459 793 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-227ENST00000636549 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 SMC4Q9NTJ3 1288 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 DCAF8L1A6NGE4 600 aa22.29■■□□□ 1.16
CACNA1A-227ENST00000636549 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 TNNT3P45378 269 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-227ENST00000636549 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms