RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 PATL2C9JE40 543 aaKnown RBP22.2■■□□□ 1.14
CACNA1A-225ENST00000636389 MIER1Q8N108 512 aa22.2■■□□□ 1.14
CACNA1A-225ENST00000636389 GORABQ5T7V8 394 aa22.19■■□□□ 1.14
CACNA1A-225ENST00000636389 NOP58Q9Y2X3 529 aaKnown RBP22.19■■□□□ 1.14
CACNA1A-225ENST00000636389 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
CACNA1A-225ENST00000636389 TAF7LQ5H9L4 462 aa22.17■■□□□ 1.14
CACNA1A-225ENST00000636389 MLECQ14165 292 aa22.16■■□□□ 1.14
CACNA1A-225ENST00000636389 MARCH6O60337 910 aa22.14■■□□□ 1.14
CACNA1A-225ENST00000636389 PES1O00541 588 aaKnown RBP22.14■■□□□ 1.13
CACNA1A-225ENST00000636389 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
CACNA1A-225ENST00000636389 GZF1Q9H116 711 aaPredicted RBP22.13■■□□□ 1.13
CACNA1A-225ENST00000636389 SRPK2P78362 688 aaKnown RBP22.12■■□□□ 1.13
CACNA1A-225ENST00000636389 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
CACNA1A-225ENST00000636389 HTATSF1O43719 755 aaKnown RBP22.09■■□□□ 1.13
CACNA1A-225ENST00000636389 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
CACNA1A-225ENST00000636389 CCDC34Q96HJ3 373 aa22.08■■□□□ 1.13
CACNA1A-225ENST00000636389 FRAT2O75474 233 aaPredicted RBP22.08■■□□□ 1.13
CACNA1A-225ENST00000636389 SETQ01105 290 aaPredicted RBP22.07■■□□□ 1.12
CACNA1A-225ENST00000636389 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
CACNA1A-225ENST00000636389 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
CACNA1A-225ENST00000636389 TCEAL9Q9UHQ7 104 aa22.06■■□□□ 1.12
CACNA1A-225ENST00000636389 USP35Q9P2H5 1018 aa22.04■■□□□ 1.12
CACNA1A-225ENST00000636389 GPATCH3Q96I76 525 aa22.04■■□□□ 1.12
CACNA1A-225ENST00000636389 TPM3P06753 285 aa22.03■■□□□ 1.12
CACNA1A-225ENST00000636389 TRIM6-TRIM34B2RNG4 842 aa22.03■■□□□ 1.12
CACNA1A-225ENST00000636389 CFAP44Q96MT7 982 aa22.02■■□□□ 1.12
CACNA1A-225ENST00000636389 TPD52L1Q16890 204 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-225ENST00000636389 SYAP1Q96A49 352 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-225ENST00000636389 TOMM22Q9NS69 142 aa22.01■■□□□ 1.11
CACNA1A-225ENST00000636389 CALRP27797 417 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-225ENST00000636389 GBP4Q96PP9 640 aa21.99■■□□□ 1.11
CACNA1A-225ENST00000636389 RAD21O60216 631 aa21.99■■□□□ 1.11
CACNA1A-225ENST00000636389 STK26Q9P289 416 aa21.97■■□□□ 1.11
CACNA1A-225ENST00000636389 GTF2E1P29083 439 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-225ENST00000636389 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-225ENST00000636389 NOL8Q76FK4 1167 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-225ENST00000636389 TSR1Q2NL82 804 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-225ENST00000636389 CCAR2Q8N163 923 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-225ENST00000636389 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
CACNA1A-225ENST00000636389 MORC1Q86VD1 984 aa21.93■■□□□ 1.1
CACNA1A-225ENST00000636389 CTDP1Q9Y5B0 961 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-225ENST00000636389 PTMSP20962 102 aa21.92■■□□□ 1.1
CACNA1A-225ENST00000636389 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-225ENST00000636389 MSH5O43196 834 aa21.92■■□□□ 1.1
CACNA1A-225ENST00000636389 ITPRIPQ8IWB1 547 aa21.92■■□□□ 1.1
CACNA1A-225ENST00000636389 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-225ENST00000636389 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
CACNA1A-225ENST00000636389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.89■■□□□ 1.17e-11■■■■■ 260.8
CACNA1A-225ENST00000636389 RRP12Q5JTH9 1297 aaKnown RBP21.89■■□□□ 1.09
CACNA1A-225ENST00000636389 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-225ENST00000636389 SF3A1Q15459 793 aaKnown RBP21.88■■□□□ 1.09
CACNA1A-225ENST00000636389 CSPP1Q1MSJ5 1256 aa21.88■■□□□ 1.09
CACNA1A-225ENST00000636389 SLKQ9H2G2 1235 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-225ENST00000636389 TPM2P07951 284 aa21.87■■□□□ 1.09
CACNA1A-225ENST00000636389 IPO8O15397 1037 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-225ENST00000636389 TMF1P82094 1093 aa21.86■■□□□ 1.09
CACNA1A-225ENST00000636389 KANK1Q14678 1352 aa21.86■■□□□ 1.09
CACNA1A-225ENST00000636389 DEKP35659 375 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-225ENST00000636389 FOXD4L1Q9NU39 408 aa21.85■■□□□ 1.09
CACNA1A-225ENST00000636389 FOXD4L5Q5VV16 416 aaPredicted RBP21.85■■□□□ 1.09
CACNA1A-225ENST00000636389 FOXD4L4Q8WXT5 416 aaPredicted RBP21.85■■□□□ 1.09
CACNA1A-225ENST00000636389 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
CACNA1A-225ENST00000636389 SPAG9O60271 1321 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-225ENST00000636389 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.08
CACNA1A-225ENST00000636389 PCMTD1Q96MG8 357 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-225ENST00000636389 CCDC70Q6NSX1 233 aa21.82■■□□□ 1.08
CACNA1A-225ENST00000636389 H3BQV1 296 aa21.81■■□□□ 1.08
CACNA1A-225ENST00000636389 IFFO2Q5TF58 517 aa21.81■■□□□ 1.08
CACNA1A-225ENST00000636389 HDGFL2Q7Z4V5 671 aaPredicted RBP21.81■■□□□ 1.08
CACNA1A-225ENST00000636389 DCAF11Q8TEB1 546 aa21.8■■□□□ 1.08
CACNA1A-225ENST00000636389 AKAP17AQ02040 695 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-225ENST00000636389 FBXW7Q969H0 707 aa21.79■■□□□ 1.08
CACNA1A-225ENST00000636389 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-225ENST00000636389 KIF16BQ96L93 1317 aa21.79■■□□□ 1.08
CACNA1A-225ENST00000636389 PHF14O94880 888 aa21.78■■□□□ 1.08
CACNA1A-225ENST00000636389 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
CACNA1A-225ENST00000636389 KLHL34Q8N239 644 aa21.78■■□□□ 1.08
CACNA1A-225ENST00000636389 TPM1P09493 284 aa21.76■■□□□ 1.07
CACNA1A-225ENST00000636389 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
CACNA1A-225ENST00000636389 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-225ENST00000636389 NOL10Q9BSC4 688 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 GOLGA6L19H0YKK7 550 aa21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 ODF2Q5BJF6 829 aa21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 FOXD4L6Q3SYB3 417 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 FOXD4L3Q6VB84 417 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 CCDC43Q96MW1 224 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-225ENST00000636389 AMOTL1Q8IY63 956 aa21.71■■□□□ 1.07
CACNA1A-225ENST00000636389 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
CACNA1A-225ENST00000636389 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-225ENST00000636389 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
CACNA1A-225ENST00000636389 GOLGA6L3A6NEY3 463 aa21.7■■□□□ 1.06
CACNA1A-225ENST00000636389 LTV1Q96GA3 475 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-225ENST00000636389 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
CACNA1A-225ENST00000636389 FAM184AQ8NB25 1140 aa21.7■■□□□ 1.06
CACNA1A-225ENST00000636389 KIF3AQ9Y496 699 aa21.68■■□□□ 1.06
CACNA1A-225ENST00000636389 MCTP1Q6DN14 999 aa21.68■■□□□ 1.06
CACNA1A-225ENST00000636389 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-225ENST00000636389 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-225ENST00000636389 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms