RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 IRF5Q13568 498 aa7.1□□□□□ -1.27
SDCBP-213ENST00000630925 PSMD1Q99460 953 aa7.1□□□□□ -1.27
SDCBP-213ENST00000630925 ZBTB12Q9Y330 459 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-213ENST00000630925 A6NJR5 290 aa7.1□□□□□ -1.27
SDCBP-213ENST00000630925 CLSTN1O94985 981 aa7.1□□□□□ -1.27
SDCBP-213ENST00000630925 FGD1P98174 961 aa7.09□□□□□ -1.27
SDCBP-213ENST00000630925 PIP4P2Q8N4L2 257 aa7.09□□□□□ -1.27
SDCBP-213ENST00000630925 FLIIQ13045 1269 aa7.08□□□□□ -1.28
SDCBP-213ENST00000630925 RETREG2Q8NC44 543 aa7.08□□□□□ -1.28
SDCBP-213ENST00000630925 ONECUT3O60422 494 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-213ENST00000630925 TMED8Q6PL24 325 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-213ENST00000630925 ZNF316A6NFI3 1004 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-213ENST00000630925 KDM4CQ9H3R0 1056 aa7.07□□□□□ -1.28
SDCBP-213ENST00000630925 FBXW7Q969H0 707 aa7.07□□□□□ -1.28
SDCBP-213ENST00000630925 CLUAP1Q96AJ1 413 aa7.07□□□□□ -1.28
SDCBP-213ENST00000630925 PKNOX2Q96KN3 472 aa7.07□□□□□ -1.28
SDCBP-213ENST00000630925 AMOTL2Q9Y2J4 779 aa7.06□□□□□ -1.28
SDCBP-213ENST00000630925 IRX6P78412 446 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-213ENST00000630925 REM2Q8IYK8 340 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-213ENST00000630925 ARID4BQ4LE39 1312 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-213ENST00000630925 MKRN4PQ13434 485 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-213ENST00000630925 RNF25Q96BH1 459 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-213ENST00000630925 IGSF5Q9NSI5 407 aa7.04□□□□□ -1.28
SDCBP-213ENST00000630925 CADPSQ9ULU8 1353 aa7.04□□□□□ -1.28
SDCBP-213ENST00000630925 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
SDCBP-213ENST00000630925 NACADO15069 1562 aa7.02□□□□□ -1.29
SDCBP-213ENST00000630925 PRDM16Q9HAZ2 1276 aa7.02□□□□□ -1.29
SDCBP-213ENST00000630925 FXR2P51116 673 aaKnown RBP eCLIP7.02□□□□□ -1.29
SDCBP-213ENST00000630925 TESPA1A2RU30 521 aaPredicted RBP7.01□□□□□ -1.29
SDCBP-213ENST00000630925 ZNF326Q5BKZ1 582 aaKnown RBP7□□□□□ -1.29
SDCBP-213ENST00000630925 AK7Q96M32 723 aa7□□□□□ -1.29
SDCBP-213ENST00000630925 CANXP27824 592 aaKnown RBP6.99□□□□□ -1.29
SDCBP-213ENST00000630925 CIZ1Q9ULV3 898 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-213ENST00000630925 SERPINA10Q9UK55 444 aa6.99□□□□□ -1.29
SDCBP-213ENST00000630925 UNCXA6NJT0 531 aa6.98□□□□□ -1.29
SDCBP-213ENST00000630925 KDM4AO75164 1064 aa6.98□□□□□ -1.29
SDCBP-213ENST00000630925 ARIH1Q9Y4X5 557 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-213ENST00000630925 SEMA3EO15041 775 aa6.97□□□□□ -1.29
SDCBP-213ENST00000630925 ZNF777Q9ULD5 760 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-213ENST00000630925 EIF4G1Q04637 1599 aaKnown RBP6.97□□□□□ -1.29
SDCBP-213ENST00000630925 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-213ENST00000630925 CCDC136Q96JN2 1154 aa6.96□□□□□ -1.3
SDCBP-213ENST00000630925 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
SDCBP-213ENST00000630925 CADPS2Q86UW7 1296 aa6.95□□□□□ -1.3
SDCBP-213ENST00000630925 FAM117AQ9C073 453 aa6.95□□□□□ -1.3
SDCBP-213ENST00000630925 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-213ENST00000630925 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
SDCBP-213ENST00000630925 SPATA32Q96LK8 384 aa6.94□□□□□ -1.3
SDCBP-213ENST00000630925 ZNF526Q8TF50 670 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-213ENST00000630925 PLEKHG3A1L390 1219 aa6.93□□□□□ -1.3
SDCBP-213ENST00000630925 PDE4DQ08499 809 aa6.92□□□□□ -1.3
SDCBP-213ENST00000630925 TEX2Q8IWB9 1127 aa6.92□□□□□ -1.3
SDCBP-213ENST00000630925 FNBP4Q8N3X1 1017 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-213ENST00000630925 A0A0U1RQG5 324 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-213ENST00000630925 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
SDCBP-213ENST00000630925 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
SDCBP-213ENST00000630925 TRIM66O15016 1216 aa6.91□□□□□ -1.3
SDCBP-213ENST00000630925 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-213ENST00000630925 LOC102724159A0A0B4J2E5 919 aa6.89□□□□□ -1.31
SDCBP-213ENST00000630925 PWP2Q15269 919 aaKnown RBP6.89□□□□□ -1.31
SDCBP-213ENST00000630925 ILDR1Q86SU0 546 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-213ENST00000630925 POTEMA6NI47 508 aa6.89□□□□□ -1.31
SDCBP-213ENST00000630925 KCNA1Q09470 495 aa6.89□□□□□ -1.31
SDCBP-213ENST00000630925 ZC3H4Q9UPT8 1303 aaKnown RBP6.88□□□□□ -1.31
SDCBP-213ENST00000630925 MCM6Q14566 821 aa6.88□□□□□ -1.31
SDCBP-213ENST00000630925 OSCARQ8IYS5 282 aa6.88□□□□□ -1.31
SDCBP-213ENST00000630925 PLCD3Q8N3E9 789 aa6.88□□□□□ -1.31
SDCBP-213ENST00000630925 NAP1L5Q96NT1 182 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-213ENST00000630925 RIPOR2Q9Y4F9 1068 aa6.88□□□□□ -1.31
SDCBP-213ENST00000630925 PLEKHD1A6NEE1 506 aa6.87□□□□□ -1.31
SDCBP-213ENST00000630925 RYDENQ9NUL5 291 aaKnown RBP6.87□□□□□ -1.31
SDCBP-213ENST00000630925 STK25O00506 426 aa6.86□□□□□ -1.31
SDCBP-213ENST00000630925 EVX2Q03828 476 aa6.86□□□□□ -1.31
SDCBP-213ENST00000630925 SETQ01105 290 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-213ENST00000630925 EXOC8Q8IYI6 725 aa6.86□□□□□ -1.31
SDCBP-213ENST00000630925 BRD1O95696 1058 aa6.85□□□□□ -1.31
SDCBP-213ENST00000630925 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
SDCBP-213ENST00000630925 ZEB1P37275 1124 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-213ENST00000630925 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
SDCBP-213ENST00000630925 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
SDCBP-213ENST00000630925 NOL8Q76FK4 1167 aaKnown RBP6.85□□□□□ -1.31
SDCBP-213ENST00000630925 MAFGO15525 162 aa6.84□□□□□ -1.31
SDCBP-213ENST00000630925 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-213ENST00000630925 RBM47A0AV96 593 aaKnown RBP6.83□□□□□ -1.32
SDCBP-213ENST00000630925 PPP1R15AO75807 674 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-213ENST00000630925 POM121Q96HA1 1249 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 MYT1LQ9UL68 1186 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 KRI1Q8N9T8 703 aaKnown RBP6.83□□□□□ -1.32
SDCBP-213ENST00000630925 SIRT1Q96EB6 747 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 DRC1Q96MC2 740 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
SDCBP-213ENST00000630925 SND1Q7KZF4 910 aaKnown RBP eCLIP6.82□□□□□ -1.323e-10■■■□□ 16.4
SDCBP-213ENST00000630925 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
SDCBP-213ENST00000630925 C19orf67A6NJJ6 358 aa6.81□□□□□ -1.32
SDCBP-213ENST00000630925 MARCH6O60337 910 aa6.81□□□□□ -1.32
SDCBP-213ENST00000630925 STAG3Q9UJ98 1225 aa6.81□□□□□ -1.32
SDCBP-213ENST00000630925 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
SDCBP-213ENST00000630925 ANKRD62A6NC57 917 aa6.8□□□□□ -1.32
SDCBP-213ENST00000630925 AAMPQ13685 434 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms