RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 KIF3AQ9Y496 699 aa11.23□□□□□ -0.61
GABRB3-216ENST00000628124 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
GABRB3-216ENST00000628124 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
GABRB3-216ENST00000628124 TMF1P82094 1093 aa11.22□□□□□ -0.61
GABRB3-216ENST00000628124 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
GABRB3-216ENST00000628124 GORABQ5T7V8 394 aa11.2□□□□□ -0.62
GABRB3-216ENST00000628124 CFDP1Q9UEE9 299 aaPredicted RBP11.2□□□□□ -0.62
GABRB3-216ENST00000628124 PHF14O94880 888 aa11.19□□□□□ -0.62
GABRB3-216ENST00000628124 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
GABRB3-216ENST00000628124 GPS2Q13227 327 aa11.19□□□□□ -0.62
GABRB3-216ENST00000628124 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
GABRB3-216ENST00000628124 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
GABRB3-216ENST00000628124 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-216ENST00000628124 MARCH6O60337 910 aa11.18□□□□□ -0.62
GABRB3-216ENST00000628124 PDE4CQ08493 712 aa11.18□□□□□ -0.62
GABRB3-216ENST00000628124 KANK1Q14678 1352 aa11.17□□□□□ -0.62
GABRB3-216ENST00000628124 G3V3G9 751 aa11.17□□□□□ -0.62
GABRB3-216ENST00000628124 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
GABRB3-216ENST00000628124 TPM2P07951 284 aa11.17□□□□□ -0.62
GABRB3-216ENST00000628124 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
GABRB3-216ENST00000628124 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
GABRB3-216ENST00000628124 HMMRO75330 724 aa11.16□□□□□ -0.62
GABRB3-216ENST00000628124 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
GABRB3-216ENST00000628124 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
GABRB3-216ENST00000628124 CLIP1P30622 1438 aa11.15□□□□□ -0.62
GABRB3-216ENST00000628124 TPM1P09493 284 aa11.15□□□□□ -0.62
GABRB3-216ENST00000628124 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-216ENST00000628124 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.63
GABRB3-216ENST00000628124 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
GABRB3-216ENST00000628124 DEKP35659 375 aaKnown RBP11.14□□□□□ -0.63
GABRB3-216ENST00000628124 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
GABRB3-216ENST00000628124 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
GABRB3-216ENST00000628124 RRP12Q5JTH9 1297 aaKnown RBP11.13□□□□□ -0.63
GABRB3-216ENST00000628124 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
GABRB3-216ENST00000628124 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
GABRB3-216ENST00000628124 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
GABRB3-216ENST00000628124 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-216ENST00000628124 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
GABRB3-216ENST00000628124 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
GABRB3-216ENST00000628124 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
GABRB3-216ENST00000628124 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
GABRB3-216ENST00000628124 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
GABRB3-216ENST00000628124 APBB1O00213 710 aa11.1□□□□□ -0.63
GABRB3-216ENST00000628124 CDR1P51861 262 aa11.1□□□□□ -0.63
GABRB3-216ENST00000628124 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-216ENST00000628124 IPO7O95373 1038 aaKnown RBP11.1□□□□□ -0.63
GABRB3-216ENST00000628124 SENP3-EIF4A1A0A087X0R7 540 aa11.09□□□□□ -0.63
GABRB3-216ENST00000628124 CCDC47Q96A33 483 aaKnown RBP11.09□□□□□ -0.63
GABRB3-216ENST00000628124 SOX12O15370 315 aa11.09□□□□□ -0.63
GABRB3-216ENST00000628124 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
GABRB3-216ENST00000628124 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
GABRB3-216ENST00000628124 ST18O60284 1047 aa11.08□□□□□ -0.64
GABRB3-216ENST00000628124 ITPRIPQ8IWB1 547 aa11.08□□□□□ -0.64
GABRB3-216ENST00000628124 CHMP3Q9Y3E7 222 aa11.08□□□□□ -0.64
GABRB3-216ENST00000628124 ARID3AQ99856 593 aa11.08□□□□□ -0.64
GABRB3-216ENST00000628124 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
GABRB3-216ENST00000628124 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-216ENST00000628124 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
GABRB3-216ENST00000628124 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
GABRB3-216ENST00000628124 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
GABRB3-216ENST00000628124 FRAT2O75474 233 aaPredicted RBP11.07□□□□□ -0.64
GABRB3-216ENST00000628124 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
GABRB3-216ENST00000628124 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
GABRB3-216ENST00000628124 ANKRD20A12PQ8NF67 263 aa11.06□□□□□ -0.64
GABRB3-216ENST00000628124 EEA1Q15075 1411 aa11.06□□□□□ -0.64
GABRB3-216ENST00000628124 LRRFIP1Q32MZ4 808 aaKnown RBP11.06□□□□□ -0.64
GABRB3-216ENST00000628124 KTN1Q86UP2 1357 aaKnown RBP11.06□□□□□ -0.64
GABRB3-216ENST00000628124 ZCCHC6Q5VYS8 1495 aaKnown RBP11.06□□□□□ -0.64
GABRB3-216ENST00000628124 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
GABRB3-216ENST00000628124 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
GABRB3-216ENST00000628124 CCER2I3L3R5 266 aa11.05□□□□□ -0.64
GABRB3-216ENST00000628124 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
GABRB3-216ENST00000628124 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-216ENST00000628124 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-216ENST00000628124 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
GABRB3-216ENST00000628124 BECN2A8MW95 431 aa11.05□□□□□ -0.64
GABRB3-216ENST00000628124 TEX35Q5T0J7 233 aa11.04□□□□□ -0.64
GABRB3-216ENST00000628124 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
GABRB3-216ENST00000628124 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
GABRB3-216ENST00000628124 H3BQV1 296 aa11.04□□□□□ -0.64
GABRB3-216ENST00000628124 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
GABRB3-216ENST00000628124 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-216ENST00000628124 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 DCAF11Q8TEB1 546 aa11.03□□□□□ -0.64
GABRB3-216ENST00000628124 PATL2C9JE40 543 aaKnown RBP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
GABRB3-216ENST00000628124 FAM184AQ8NB25 1140 aa11.02□□□□□ -0.64
GABRB3-216ENST00000628124 MFAP1P55081 439 aaKnown RBP11.02□□□□□ -0.65
GABRB3-216ENST00000628124 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
GABRB3-216ENST00000628124 SKOR2Q2VWA4 1001 aaPredicted RBP11.02□□□□□ -0.65
GABRB3-216ENST00000628124 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
GABRB3-216ENST00000628124 NOL10Q9BSC4 688 aaKnown RBP11.01□□□□□ -0.65
GABRB3-216ENST00000628124 HSP90AA2PQ14568 343 aaPredicted RBP11.01□□□□□ -0.65
GABRB3-216ENST00000628124 GOLGA3Q08378 1498 aa11.01□□□□□ -0.65
GABRB3-216ENST00000628124 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
GABRB3-216ENST00000628124 CCNB3Q8WWL7 1395 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms