RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
ATRX-219ENST00000625063 NLRP6P59044 892 aa11.89□□□□□ -0.51
ATRX-219ENST00000625063 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
ATRX-219ENST00000625063 G3V3G9 751 aa11.88□□□□□ -0.51
ATRX-219ENST00000625063 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
ATRX-219ENST00000625063 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
ATRX-219ENST00000625063 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
ATRX-219ENST00000625063 ST18O60284 1047 aa11.8□□□□□ -0.52
ATRX-219ENST00000625063 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
ATRX-219ENST00000625063 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
ATRX-219ENST00000625063 CUX2O14529 1486 aa11.77□□□□□ -0.52
ATRX-219ENST00000625063 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
ATRX-219ENST00000625063 PPP1R37O75864 691 aa11.76□□□□□ -0.53
ATRX-219ENST00000625063 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
ATRX-219ENST00000625063 SNPHO15079 494 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 ERCC6Q03468 1493 aa11.68□□□□□ -0.54
ATRX-219ENST00000625063 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
ATRX-219ENST00000625063 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
ATRX-219ENST00000625063 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
ATRX-219ENST00000625063 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
ATRX-219ENST00000625063 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
ATRX-219ENST00000625063 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
ATRX-219ENST00000625063 KIF3CO14782 793 aa11.58□□□□□ -0.56
ATRX-219ENST00000625063 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
ATRX-219ENST00000625063 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
ATRX-219ENST00000625063 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
ATRX-219ENST00000625063 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
ATRX-219ENST00000625063 EMP3P54852 163 aa11.51□□□□□ -0.57
ATRX-219ENST00000625063 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
ATRX-219ENST00000625063 RIMBP2O15034 1052 aa11.48□□□□□ -0.57
ATRX-219ENST00000625063 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
ATRX-219ENST00000625063 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
ATRX-219ENST00000625063 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATRX-219ENST00000625063 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
ATRX-219ENST00000625063 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
ATRX-219ENST00000625063 DSG2Q14126 1118 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 NESP48681 1621 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
ATRX-219ENST00000625063 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
ATRX-219ENST00000625063 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 FOXK1P85037 733 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 CRISPLD2Q9H0B8 497 aa11.42□□□□□ -0.58
ATRX-219ENST00000625063 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
ATRX-219ENST00000625063 ERBB3P21860 1342 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 KRTAP3-2Q9BYR7 98 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
ATRX-219ENST00000625063 SLC34A2O95436 690 aa11.37□□□□□ -0.59
ATRX-219ENST00000625063 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
ATRX-219ENST00000625063 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
ATRX-219ENST00000625063 NUDT7P0C024 238 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
ATRX-219ENST00000625063 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
ATRX-219ENST00000625063 ATAD2BQ9ULI0 1458 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 PDE4AP27815 886 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
ATRX-219ENST00000625063 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
ATRX-219ENST00000625063 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
ATRX-219ENST00000625063 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
ATRX-219ENST00000625063 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
ATRX-219ENST00000625063 MFSD10Q14728 455 aa11.28□□□□□ -0.6
ATRX-219ENST00000625063 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
ATRX-219ENST00000625063 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
ATRX-219ENST00000625063 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
ATRX-219ENST00000625063 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
ATRX-219ENST00000625063 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
ATRX-219ENST00000625063 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
ATRX-219ENST00000625063 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
ATRX-219ENST00000625063 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
ATRX-219ENST00000625063 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
ATRX-219ENST00000625063 TBC1D12O60347 775 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
ATRX-219ENST00000625063 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
ATRX-219ENST00000625063 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
ATRX-219ENST00000625063 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
ATRX-219ENST00000625063 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
ATRX-219ENST00000625063 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
ATRX-219ENST00000625063 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
ATRX-219ENST00000625063 EVI5O60447 810 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
ATRX-219ENST00000625063 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
ATRX-219ENST00000625063 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
ATRX-219ENST00000625063 WDR62O43379 1518 aa11.09□□□□□ -0.63
ATRX-219ENST00000625063 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
ATRX-219ENST00000625063 DPYSL4O14531 572 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
ATRX-219ENST00000625063 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms