RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 MS4A1P11836 297 aa14.59□□□□□ -0.07
CLTC-215ENST00000621829 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
CLTC-215ENST00000621829 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
CLTC-215ENST00000621829 TEX35Q5T0J7 233 aa14.57□□□□□ -0.08
CLTC-215ENST00000621829 CREBRFQ8IUR6 639 aa14.57□□□□□ -0.08
CLTC-215ENST00000621829 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
CLTC-215ENST00000621829 HTATSF1O43719 755 aaKnown RBP14.57□□□□□ -0.08
CLTC-215ENST00000621829 PHF14O94880 888 aa14.57□□□□□ -0.08
CLTC-215ENST00000621829 HSP90B1P14625 803 aaKnown RBP14.56□□□□□ -0.08
CLTC-215ENST00000621829 SIN3AQ96ST3 1273 aa14.56□□□□□ -0.08
CLTC-215ENST00000621829 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
CLTC-215ENST00000621829 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
CLTC-215ENST00000621829 CARD11Q9BXL7 1154 aa14.55□□□□□ -0.08
CLTC-215ENST00000621829 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
CLTC-215ENST00000621829 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
CLTC-215ENST00000621829 GPS2Q13227 327 aa14.53□□□□□ -0.08
CLTC-215ENST00000621829 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
CLTC-215ENST00000621829 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
CLTC-215ENST00000621829 NOM1Q5C9Z4 860 aaKnown RBP14.53□□□□□ -0.08
CLTC-215ENST00000621829 CCER2I3L3R5 266 aa14.52□□□□□ -0.08
CLTC-215ENST00000621829 IL27Q8NEV9 243 aa14.52□□□□□ -0.08
CLTC-215ENST00000621829 U2SURPO15042 1029 aaKnown RBP14.51□□□□□ -0.09
CLTC-215ENST00000621829 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.51□□□□□ -0.09
CLTC-215ENST00000621829 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
CLTC-215ENST00000621829 FOXD4L6Q3SYB3 417 aaPredicted RBP14.5□□□□□ -0.09
CLTC-215ENST00000621829 FOXD4L3Q6VB84 417 aaPredicted RBP14.5□□□□□ -0.09
CLTC-215ENST00000621829 DDX49Q9Y6V7 483 aaKnown RBP14.5□□□□□ -0.09
CLTC-215ENST00000621829 TPM3P06753 285 aa14.5□□□□□ -0.09
CLTC-215ENST00000621829 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
CLTC-215ENST00000621829 PRM3Q9NNZ6 103 aa14.48□□□□□ -0.09
CLTC-215ENST00000621829 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
CLTC-215ENST00000621829 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
CLTC-215ENST00000621829 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
CLTC-215ENST00000621829 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
CLTC-215ENST00000621829 FANCIQ9NVI1 1328 aa14.47□□□□□ -0.09
CLTC-215ENST00000621829 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
CLTC-215ENST00000621829 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
CLTC-215ENST00000621829 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
CLTC-215ENST00000621829 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
CLTC-215ENST00000621829 RWDD1Q9H446 243 aaPredicted RBP14.45□□□□□ -0.1
CLTC-215ENST00000621829 BRPF3Q9ULD4 1205 aa14.45□□□□□ -0.1
CLTC-215ENST00000621829 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
CLTC-215ENST00000621829 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
CLTC-215ENST00000621829 MAP7D2Q96T17 732 aa14.44□□□□□ -0.1
CLTC-215ENST00000621829 RRP12Q5JTH9 1297 aaKnown RBP14.44□□□□□ -0.1
CLTC-215ENST00000621829 PDE4AP27815 886 aa14.44□□□□□ -0.1
CLTC-215ENST00000621829 GOLGA6L19H0YKK7 550 aa14.43□□□□□ -0.1
CLTC-215ENST00000621829 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
CLTC-215ENST00000621829 SKOR2Q2VWA4 1001 aaPredicted RBP14.43□□□□□ -0.1
CLTC-215ENST00000621829 ISY1Q9ULR0 285 aaKnown RBP14.42□□□□□ -0.1
CLTC-215ENST00000621829 PES1O00541 588 aaKnown RBP14.42□□□□□ -0.1
CLTC-215ENST00000621829 CLIP1P30622 1438 aa14.42□□□□□ -0.1
CLTC-215ENST00000621829 PMFBP1Q8TBY8 1022 aa14.41□□□□□ -0.1
CLTC-215ENST00000621829 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
CLTC-215ENST00000621829 CCDC66A2RUB6 948 aa14.4□□□□□ -0.1
CLTC-215ENST00000621829 RDXP35241 583 aaKnown RBP14.4□□□□□ -0.1
CLTC-215ENST00000621829 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
CLTC-215ENST00000621829 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
CLTC-215ENST00000621829 HOMER1Q86YM7 354 aa14.39□□□□□ -0.11
CLTC-215ENST00000621829 PLCD4Q9BRC7 762 aa14.39□□□□□ -0.11
CLTC-215ENST00000621829 ST18O60284 1047 aa14.38□□□□□ -0.11
CLTC-215ENST00000621829 HSP90AB3PQ58FF7 597 aa14.38□□□□□ -0.11
CLTC-215ENST00000621829 CWC15Q9P013 229 aaKnown RBP14.38□□□□□ -0.11
CLTC-215ENST00000621829 MTERF4Q7Z6M4 381 aaKnown RBP14.38□□□□□ -0.11
CLTC-215ENST00000621829 TPM2P07951 284 aa14.38□□□□□ -0.11
CLTC-215ENST00000621829 H0YHG0 523 aa14.37□□□□□ -0.11
CLTC-215ENST00000621829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
CLTC-215ENST00000621829 BECN2A8MW95 431 aa14.36□□□□□ -0.11
CLTC-215ENST00000621829 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CLTC-215ENST00000621829 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
CLTC-215ENST00000621829 KCNH8Q96L42 1107 aa14.35□□□□□ -0.11
CLTC-215ENST00000621829 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
CLTC-215ENST00000621829 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
CLTC-215ENST00000621829 NPHP1O15259 732 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
CLTC-215ENST00000621829 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 TSR1Q2NL82 804 aaKnown RBP14.34□□□□□ -0.11
CLTC-215ENST00000621829 NFKBIBQ15653 356 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 SKIDA1Q1XH10 827 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
CLTC-215ENST00000621829 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
CLTC-215ENST00000621829 CCDC34Q96HJ3 373 aa14.32□□□□□ -0.12
CLTC-215ENST00000621829 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
CLTC-215ENST00000621829 ARGLU1Q9NWB6 273 aaPredicted RBP14.32□□□□□ -0.12
CLTC-215ENST00000621829 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
CLTC-215ENST00000621829 AK7Q96M32 723 aa14.32□□□□□ -0.12
CLTC-215ENST00000621829 CLUAP1Q96AJ1 413 aa14.31□□□□□ -0.12
CLTC-215ENST00000621829 HSPA5P11021 654 aaKnown RBP14.31□□□□□ -0.12
CLTC-215ENST00000621829 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
CLTC-215ENST00000621829 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
CLTC-215ENST00000621829 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
CLTC-215ENST00000621829 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
CLTC-215ENST00000621829 H3BQV1 296 aa14.3□□□□□ -0.12
CLTC-215ENST00000621829 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
CLTC-215ENST00000621829 IFFO2Q5TF58 517 aa14.3□□□□□ -0.12
CLTC-215ENST00000621829 HSP90B2PQ58FF3 399 aa14.29□□□□□ -0.12
CLTC-215ENST00000621829 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
CLTC-215ENST00000621829 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
CLTC-215ENST00000621829 MCTP1Q6DN14 999 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms