RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.04
PABPC1-224ENST00000610907 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
PABPC1-224ENST00000610907 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
PABPC1-224ENST00000610907 DENND4BO75064 1496 aaPredicted RBP14.81□□□□□ -0.04
PABPC1-224ENST00000610907 ABCA8O94911 1581 aa14.81□□□□□ -0.04
PABPC1-224ENST00000610907 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
PABPC1-224ENST00000610907 GPATCH8Q9UKJ3 1502 aaKnown RBP14.8□□□□□ -0.04
PABPC1-224ENST00000610907 KDM6BO15054 1643 aa14.8□□□□□ -0.04
PABPC1-224ENST00000610907 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-224ENST00000610907 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
PABPC1-224ENST00000610907 PLEKHD1A6NEE1 506 aa14.78□□□□□ -0.04
PABPC1-224ENST00000610907 CAMSAP2Q08AD1 1489 aa14.78□□□□□ -0.04
PABPC1-224ENST00000610907 ADGRL2O95490 1459 aa14.77□□□□□ -0.04
PABPC1-224ENST00000610907 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
PABPC1-224ENST00000610907 ADGBQ8N7X0 1667 aa14.76□□□□□ -0.05
PABPC1-224ENST00000610907 CCER2I3L3R5 266 aa14.76□□□□□ -0.05
PABPC1-224ENST00000610907 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
PABPC1-224ENST00000610907 NCOA1Q15788 1441 aa14.75□□□□□ -0.05
PABPC1-224ENST00000610907 ATP10BO94823 1461 aa14.74□□□□□ -0.05
PABPC1-224ENST00000610907 KIF14Q15058 1648 aa14.74□□□□□ -0.05
PABPC1-224ENST00000610907 RPRD2Q5VT52 1461 aaKnown RBP14.73□□□□□ -0.05
PABPC1-224ENST00000610907 ABCC10Q5T3U5 1492 aa14.72□□□□□ -0.05
PABPC1-224ENST00000610907 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
PABPC1-224ENST00000610907 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
PABPC1-224ENST00000610907 ANP32CO43423 234 aa14.72□□□□□ -0.05
PABPC1-224ENST00000610907 PTPRGP23470 1445 aa14.71□□□□□ -0.05
PABPC1-224ENST00000610907 SHANK2Q9UPX8 1470 aa14.71□□□□□ -0.05
PABPC1-224ENST00000610907 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
PABPC1-224ENST00000610907 CDC42BPAQ5VT25 1732 aa14.69□□□□□ -0.06
PABPC1-224ENST00000610907 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
PABPC1-224ENST00000610907 L3MBTL2Q969R5 705 aa14.68□□□□□ -0.06
PABPC1-224ENST00000610907 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-224ENST00000610907 PZPP20742 1482 aa14.67□□□□□ -0.06
PABPC1-224ENST00000610907 RSPH4AQ5TD94 716 aa14.66□□□□□ -0.06
PABPC1-224ENST00000610907 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-224ENST00000610907 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
PABPC1-224ENST00000610907 ARHGEF5Q12774 1597 aa14.65□□□□□ -0.06
PABPC1-224ENST00000610907 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
PABPC1-224ENST00000610907 TEX14Q8IWB6 1497 aa14.65□□□□□ -0.06
PABPC1-224ENST00000610907 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
PABPC1-224ENST00000610907 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
PABPC1-224ENST00000610907 ANKRD50Q9ULJ7 1429 aa14.64□□□□□ -0.07
PABPC1-224ENST00000610907 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
PABPC1-224ENST00000610907 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
PABPC1-224ENST00000610907 CHD1O14646 1710 aa14.64□□□□□ -0.07
PABPC1-224ENST00000610907 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
PABPC1-224ENST00000610907 FOXD1Q16676 465 aa14.62□□□□□ -0.07
PABPC1-224ENST00000610907 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
PABPC1-224ENST00000610907 KDM5DQ9BY66 1539 aa14.61□□□□□ -0.07
PABPC1-224ENST00000610907 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
PABPC1-224ENST00000610907 MBD5Q9P267 1494 aa14.59□□□□□ -0.07
PABPC1-224ENST00000610907 PREX2Q70Z35 1606 aa14.58□□□□□ -0.07
PABPC1-224ENST00000610907 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
PABPC1-224ENST00000610907 PKD2Q13563 968 aa14.56□□□□□ -0.08
PABPC1-224ENST00000610907 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
PABPC1-224ENST00000610907 SPATA31E1Q6ZUB1 1445 aa14.56□□□□□ -0.08
PABPC1-224ENST00000610907 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
PABPC1-224ENST00000610907 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
PABPC1-224ENST00000610907 NUP155O75694 1391 aa14.55□□□□□ -0.08
PABPC1-224ENST00000610907 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 SAMD9LQ8IVG5 1584 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 KIF15Q9NS87 1388 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 SUPT16HQ9Y5B9 1047 aaKnown RBP14.54□□□□□ -0.08
PABPC1-224ENST00000610907 MAST1Q9Y2H9 1570 aa14.54□□□□□ -0.08
PABPC1-224ENST00000610907 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
PABPC1-224ENST00000610907 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
PABPC1-224ENST00000610907 POLR1AO95602 1720 aaPredicted RBP14.52□□□□□ -0.08
PABPC1-224ENST00000610907 UHRF1BP1LA0JNW5 1464 aa14.52□□□□□ -0.09
PABPC1-224ENST00000610907 ARHGEF12Q9NZN5 1544 aa14.52□□□□□ -0.09
PABPC1-224ENST00000610907 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-224ENST00000610907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.5□□□□□ -0.097e-8■□□□□ 10.3
PABPC1-224ENST00000610907 CLASP1Q7Z460 1538 aa14.49□□□□□ -0.09
PABPC1-224ENST00000610907 ARHGAP5Q13017 1502 aa14.48□□□□□ -0.09
PABPC1-224ENST00000610907 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
PABPC1-224ENST00000610907 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
PABPC1-224ENST00000610907 C11orf95C9JLR9 678 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-224ENST00000610907 PLXNC1O60486 1568 aa14.46□□□□□ -0.09
PABPC1-224ENST00000610907 PLCH2O75038 1416 aa14.45□□□□□ -0.1
PABPC1-224ENST00000610907 KIF7Q2M1P5 1343 aa14.45□□□□□ -0.1
PABPC1-224ENST00000610907 ERCC6L2Q5T890 1561 aa14.45□□□□□ -0.1
PABPC1-224ENST00000610907 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
PABPC1-224ENST00000610907 SYCP2Q9BX26 1530 aa14.45□□□□□ -0.1
PABPC1-224ENST00000610907 FAM135AQ9P2D6 1515 aa14.44□□□□□ -0.1
PABPC1-224ENST00000610907 UNC13BO14795 1591 aa14.44□□□□□ -0.1
PABPC1-224ENST00000610907 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-224ENST00000610907 USP47Q96K76 1375 aa14.43□□□□□ -0.1
PABPC1-224ENST00000610907 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
PABPC1-224ENST00000610907 ZCCHC11Q5TAX3 1644 aaKnown RBP14.42□□□□□ -0.1
PABPC1-224ENST00000610907 KDM5CP41229 1560 aa14.42□□□□□ -0.1
PABPC1-224ENST00000610907 DUOX2Q9NRD8 1548 aa14.42□□□□□ -0.1
PABPC1-224ENST00000610907 ROCK2O75116 1388 aaKnown RBP14.41□□□□□ -0.1
PABPC1-224ENST00000610907 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
PABPC1-224ENST00000610907 NEFLP07196 543 aa14.4□□□□□ -0.1
PABPC1-224ENST00000610907 ERBINQ96RT1 1412 aa14.4□□□□□ -0.1
PABPC1-224ENST00000610907 IQGAP3Q86VI3 1631 aa14.39□□□□□ -0.11
PABPC1-224ENST00000610907 ATP10AO60312 1499 aa14.38□□□□□ -0.11
PABPC1-224ENST00000610907 CCDC144AA2RUR9 1427 aa14.38□□□□□ -0.11
PABPC1-224ENST00000610907 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms