RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
LARP4B-210ENST00000609318 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
LARP4B-210ENST00000609318 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
LARP4B-210ENST00000609318 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
LARP4B-210ENST00000609318 URB2Q14146 1524 aaKnown RBP13.73□□□□□ -0.21
LARP4B-210ENST00000609318 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
LARP4B-210ENST00000609318 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
LARP4B-210ENST00000609318 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
LARP4B-210ENST00000609318 CUL7Q14999 1698 aa13.7□□□□□ -0.22
LARP4B-210ENST00000609318 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
LARP4B-210ENST00000609318 SPAG9O60271 1321 aaKnown RBP13.69□□□□□ -0.22
LARP4B-210ENST00000609318 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
LARP4B-210ENST00000609318 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
LARP4B-210ENST00000609318 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
LARP4B-210ENST00000609318 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
LARP4B-210ENST00000609318 GGT6Q6P531 493 aa13.67□□□□□ -0.22
LARP4B-210ENST00000609318 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
LARP4B-210ENST00000609318 UACAQ9BZF9 1416 aa13.65□□□□□ -0.22
LARP4B-210ENST00000609318 TMF1P82094 1093 aa13.65□□□□□ -0.22
LARP4B-210ENST00000609318 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
LARP4B-210ENST00000609318 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
LARP4B-210ENST00000609318 KIF3BO15066 747 aa13.65□□□□□ -0.22
LARP4B-210ENST00000609318 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
LARP4B-210ENST00000609318 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
LARP4B-210ENST00000609318 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
LARP4B-210ENST00000609318 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
LARP4B-210ENST00000609318 MAP3K1Q13233 1512 aa13.61□□□□□ -0.23
LARP4B-210ENST00000609318 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
LARP4B-210ENST00000609318 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
LARP4B-210ENST00000609318 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
LARP4B-210ENST00000609318 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
LARP4B-210ENST00000609318 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
LARP4B-210ENST00000609318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
LARP4B-210ENST00000609318 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
LARP4B-210ENST00000609318 TNNT2P45379 298 aaPredicted RBP13.59□□□□□ -0.23
LARP4B-210ENST00000609318 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
LARP4B-210ENST00000609318 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
LARP4B-210ENST00000609318 EPRSP07814 1512 aaKnown RBP13.57□□□□□ -0.24
LARP4B-210ENST00000609318 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
LARP4B-210ENST00000609318 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
LARP4B-210ENST00000609318 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
LARP4B-210ENST00000609318 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
LARP4B-210ENST00000609318 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
LARP4B-210ENST00000609318 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
LARP4B-210ENST00000609318 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
LARP4B-210ENST00000609318 ARXQ96QS3 562 aa13.56□□□□□ -0.24
LARP4B-210ENST00000609318 POGKQ9P215 609 aa13.56□□□□□ -0.24
LARP4B-210ENST00000609318 ANKRD50Q9ULJ7 1429 aa13.55□□□□□ -0.24
LARP4B-210ENST00000609318 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
LARP4B-210ENST00000609318 MLECQ14165 292 aa13.55□□□□□ -0.24
LARP4B-210ENST00000609318 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
LARP4B-210ENST00000609318 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
LARP4B-210ENST00000609318 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
LARP4B-210ENST00000609318 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
LARP4B-210ENST00000609318 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
LARP4B-210ENST00000609318 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
LARP4B-210ENST00000609318 KTN1Q86UP2 1357 aaKnown RBP13.49□□□□□ -0.25
LARP4B-210ENST00000609318 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
LARP4B-210ENST00000609318 HDGFP51858 240 aaKnown RBP13.48□□□□□ -0.25
LARP4B-210ENST00000609318 RALBP1Q15311 655 aa13.48□□□□□ -0.25
LARP4B-210ENST00000609318 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
LARP4B-210ENST00000609318 DAPK1P53355 1430 aa13.46□□□□□ -0.25
LARP4B-210ENST00000609318 NAIPQ13075 1403 aa13.46□□□□□ -0.25
LARP4B-210ENST00000609318 USP47Q96K76 1375 aa13.46□□□□□ -0.25
LARP4B-210ENST00000609318 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.25
LARP4B-210ENST00000609318 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
LARP4B-210ENST00000609318 TRIM44Q96DX7 344 aaPredicted RBP13.46□□□□□ -0.26
LARP4B-210ENST00000609318 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.26
LARP4B-210ENST00000609318 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.26
LARP4B-210ENST00000609318 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
LARP4B-210ENST00000609318 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
LARP4B-210ENST00000609318 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
LARP4B-210ENST00000609318 SAFB2Q14151 953 aaKnown RBP eCLIP13.44□□□□□ -0.26
LARP4B-210ENST00000609318 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
LARP4B-210ENST00000609318 STK26Q9P289 416 aa13.43□□□□□ -0.26
LARP4B-210ENST00000609318 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
LARP4B-210ENST00000609318 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
LARP4B-210ENST00000609318 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
LARP4B-210ENST00000609318 A0A0G2JS52 829 aa13.42□□□□□ -0.26
LARP4B-210ENST00000609318 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
LARP4B-210ENST00000609318 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
LARP4B-210ENST00000609318 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
LARP4B-210ENST00000609318 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
LARP4B-210ENST00000609318 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
LARP4B-210ENST00000609318 PTPN23Q9H3S7 1636 aa13.41□□□□□ -0.26
LARP4B-210ENST00000609318 NBR1Q14596 966 aa13.41□□□□□ -0.26
LARP4B-210ENST00000609318 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
LARP4B-210ENST00000609318 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
LARP4B-210ENST00000609318 MYH16Q9H6N6 1097 aa13.39□□□□□ -0.27
LARP4B-210ENST00000609318 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
LARP4B-210ENST00000609318 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
LARP4B-210ENST00000609318 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
LARP4B-210ENST00000609318 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
LARP4B-210ENST00000609318 MAPK8IP3Q9UPT6 1336 aa13.38□□□□□ -0.27
LARP4B-210ENST00000609318 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
LARP4B-210ENST00000609318 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
LARP4B-210ENST00000609318 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
LARP4B-210ENST00000609318 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
LARP4B-210ENST00000609318 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
LARP4B-210ENST00000609318 ABCC5O15440 1437 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms