RNA–Protein interactions for RNA: ENST00000607016.1

NUDT3-201, Transcript of nudix hydrolase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDT3, Length 9,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDT3-201ENST00000607016 ZNF592Q92610 1267 aa17.05■□□□□ 0.32
NUDT3-201ENST00000607016 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
NUDT3-201ENST00000607016 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
NUDT3-201ENST00000607016 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
NUDT3-201ENST00000607016 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
NUDT3-201ENST00000607016 FBXO3Q9UK99 471 aa17.02■□□□□ 0.32
NUDT3-201ENST00000607016 TPM4P67936 248 aa17.01■□□□□ 0.31
NUDT3-201ENST00000607016 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
NUDT3-201ENST00000607016 PHF14O94880 888 aa16.97■□□□□ 0.31
NUDT3-201ENST00000607016 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
NUDT3-201ENST00000607016 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
NUDT3-201ENST00000607016 TEX35Q5T0J7 233 aa16.96■□□□□ 0.31
NUDT3-201ENST00000607016 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
NUDT3-201ENST00000607016 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
NUDT3-201ENST00000607016 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.3
NUDT3-201ENST00000607016 MS4A1P11836 297 aa16.95■□□□□ 0.3
NUDT3-201ENST00000607016 CHMP4BQ9H444 224 aaKnown RBP16.95■□□□□ 0.3
NUDT3-201ENST00000607016 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
NUDT3-201ENST00000607016 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
NUDT3-201ENST00000607016 DDX11L8A8MPP1 907 aa16.94■□□□□ 0.3
NUDT3-201ENST00000607016 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
NUDT3-201ENST00000607016 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
NUDT3-201ENST00000607016 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
NUDT3-201ENST00000607016 TPM3P06753 285 aa16.93■□□□□ 0.3
NUDT3-201ENST00000607016 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
NUDT3-201ENST00000607016 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
NUDT3-201ENST00000607016 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
NUDT3-201ENST00000607016 GPS2Q13227 327 aa16.9■□□□□ 0.3
NUDT3-201ENST00000607016 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
NUDT3-201ENST00000607016 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.89■□□□□ 0.29
NUDT3-201ENST00000607016 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
NUDT3-201ENST00000607016 PES1O00541 588 aaKnown RBP16.88■□□□□ 0.29
NUDT3-201ENST00000607016 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
NUDT3-201ENST00000607016 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
NUDT3-201ENST00000607016 NPHP1O15259 732 aa16.87■□□□□ 0.29
NUDT3-201ENST00000607016 RRP12Q5JTH9 1297 aaKnown RBP16.86■□□□□ 0.29
NUDT3-201ENST00000607016 CLIP1P30622 1438 aa16.86■□□□□ 0.29
NUDT3-201ENST00000607016 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
NUDT3-201ENST00000607016 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
NUDT3-201ENST00000607016 MAP7D2Q96T17 732 aa16.85■□□□□ 0.29
NUDT3-201ENST00000607016 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
NUDT3-201ENST00000607016 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
NUDT3-201ENST00000607016 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
NUDT3-201ENST00000607016 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
NUDT3-201ENST00000607016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.83■□□□□ 0.28
NUDT3-201ENST00000607016 PLCD4Q9BRC7 762 aa16.83■□□□□ 0.28
NUDT3-201ENST00000607016 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
NUDT3-201ENST00000607016 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
NUDT3-201ENST00000607016 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
NUDT3-201ENST00000607016 GOLGA6L19H0YKK7 550 aa16.81■□□□□ 0.28
NUDT3-201ENST00000607016 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
NUDT3-201ENST00000607016 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
NUDT3-201ENST00000607016 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
NUDT3-201ENST00000607016 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
NUDT3-201ENST00000607016 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
NUDT3-201ENST00000607016 RASSF8Q8NHQ8 419 aa16.8■□□□□ 0.28
NUDT3-201ENST00000607016 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
NUDT3-201ENST00000607016 CCDC70Q6NSX1 233 aa16.78■□□□□ 0.28
NUDT3-201ENST00000607016 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
NUDT3-201ENST00000607016 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.28
NUDT3-201ENST00000607016 H0YHG0 523 aa16.77■□□□□ 0.28
NUDT3-201ENST00000607016 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.28
NUDT3-201ENST00000607016 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.27
NUDT3-201ENST00000607016 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
NUDT3-201ENST00000607016 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
NUDT3-201ENST00000607016 PDE4AP27815 886 aa16.76■□□□□ 0.27
NUDT3-201ENST00000607016 SKIDA1Q1XH10 827 aa16.76■□□□□ 0.27
NUDT3-201ENST00000607016 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
NUDT3-201ENST00000607016 ST18O60284 1047 aa16.75■□□□□ 0.27
NUDT3-201ENST00000607016 TPD52L1Q16890 204 aaPredicted RBP16.75■□□□□ 0.27
NUDT3-201ENST00000607016 CEP89Q96ST8 783 aa16.75■□□□□ 0.27
NUDT3-201ENST00000607016 BECN2A8MW95 431 aa16.74■□□□□ 0.27
NUDT3-201ENST00000607016 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
NUDT3-201ENST00000607016 FANCIQ9NVI1 1328 aa16.74■□□□□ 0.27
NUDT3-201ENST00000607016 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
NUDT3-201ENST00000607016 CCDC66A2RUB6 948 aa16.74■□□□□ 0.27
NUDT3-201ENST00000607016 SKOR2Q2VWA4 1001 aaPredicted RBP16.73■□□□□ 0.27
NUDT3-201ENST00000607016 SOX12O15370 315 aa16.73■□□□□ 0.27
NUDT3-201ENST00000607016 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
NUDT3-201ENST00000607016 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
NUDT3-201ENST00000607016 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
NUDT3-201ENST00000607016 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
NUDT3-201ENST00000607016 SF3A1Q15459 793 aaKnown RBP16.72■□□□□ 0.27
NUDT3-201ENST00000607016 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
NUDT3-201ENST00000607016 RUFY1Q96T51 708 aa16.71■□□□□ 0.27
NUDT3-201ENST00000607016 CLUAP1Q96AJ1 413 aa16.71■□□□□ 0.26
NUDT3-201ENST00000607016 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
NUDT3-201ENST00000607016 CCDC34Q96HJ3 373 aa16.7■□□□□ 0.26
NUDT3-201ENST00000607016 AK7Q96M32 723 aa16.7■□□□□ 0.26
NUDT3-201ENST00000607016 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
NUDT3-201ENST00000607016 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
NUDT3-201ENST00000607016 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
NUDT3-201ENST00000607016 H3BQV1 296 aa16.69■□□□□ 0.26
NUDT3-201ENST00000607016 IFFO2Q5TF58 517 aa16.69■□□□□ 0.26
NUDT3-201ENST00000607016 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
NUDT3-201ENST00000607016 CCDC191Q8NCU4 936 aa16.68■□□□□ 0.26
NUDT3-201ENST00000607016 TPM2P07951 284 aa16.68■□□□□ 0.26
NUDT3-201ENST00000607016 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
NUDT3-201ENST00000607016 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
NUDT3-201ENST00000607016 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms