RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
HMGB1P51-201ENST00000605166 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
HMGB1P51-201ENST00000605166 NLRP6P59044 892 aa11.26□□□□□ -0.61
HMGB1P51-201ENST00000605166 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
HMGB1P51-201ENST00000605166 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
HMGB1P51-201ENST00000605166 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P51-201ENST00000605166 SLAIN1Q8ND83 568 aa11.24□□□□□ -0.61
HMGB1P51-201ENST00000605166 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
HMGB1P51-201ENST00000605166 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
HMGB1P51-201ENST00000605166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGB1P51-201ENST00000605166 BOLA1Q9Y3E2 137 aa11.23□□□□□ -0.61
HMGB1P51-201ENST00000605166 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
HMGB1P51-201ENST00000605166 MFRPQ9BY79 579 aa11.22□□□□□ -0.61
HMGB1P51-201ENST00000605166 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
HMGB1P51-201ENST00000605166 SNPHO15079 494 aa11.16□□□□□ -0.62
HMGB1P51-201ENST00000605166 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
HMGB1P51-201ENST00000605166 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
HMGB1P51-201ENST00000605166 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
HMGB1P51-201ENST00000605166 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
HMGB1P51-201ENST00000605166 E2F4Q16254 413 aa11.11□□□□□ -0.63
HMGB1P51-201ENST00000605166 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
HMGB1P51-201ENST00000605166 PPP1R37O75864 691 aa11.1□□□□□ -0.63
HMGB1P51-201ENST00000605166 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
HMGB1P51-201ENST00000605166 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
HMGB1P51-201ENST00000605166 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
HMGB1P51-201ENST00000605166 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
HMGB1P51-201ENST00000605166 SEMA3EO15041 775 aa11.01□□□□□ -0.65
HMGB1P51-201ENST00000605166 NCKAP5LQ9HCH0 1330 aa10.99□□□□□ -0.65
HMGB1P51-201ENST00000605166 PDE4AP27815 886 aa10.98□□□□□ -0.65
HMGB1P51-201ENST00000605166 MFSD10Q14728 455 aa10.97□□□□□ -0.65
HMGB1P51-201ENST00000605166 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
HMGB1P51-201ENST00000605166 POTEMA6NI47 508 aa10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 ST18O60284 1047 aa10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
HMGB1P51-201ENST00000605166 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
HMGB1P51-201ENST00000605166 ARXQ96QS3 562 aa10.95□□□□□ -0.66
HMGB1P51-201ENST00000605166 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
HMGB1P51-201ENST00000605166 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
HMGB1P51-201ENST00000605166 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
HMGB1P51-201ENST00000605166 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
HMGB1P51-201ENST00000605166 SLC24A3Q9HC58 644 aa10.94□□□□□ -0.66
HMGB1P51-201ENST00000605166 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
HMGB1P51-201ENST00000605166 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
HMGB1P51-201ENST00000605166 ZMYND10O75800 440 aa10.91□□□□□ -0.66
HMGB1P51-201ENST00000605166 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
HMGB1P51-201ENST00000605166 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
HMGB1P51-201ENST00000605166 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P51-201ENST00000605166 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
HMGB1P51-201ENST00000605166 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
HMGB1P51-201ENST00000605166 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
HMGB1P51-201ENST00000605166 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
HMGB1P51-201ENST00000605166 KIF3CO14782 793 aa10.85□□□□□ -0.67
HMGB1P51-201ENST00000605166 BARGINQ6ZT62 677 aa10.84□□□□□ -0.67
HMGB1P51-201ENST00000605166 EMP3P54852 163 aa10.83□□□□□ -0.68
HMGB1P51-201ENST00000605166 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
HMGB1P51-201ENST00000605166 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P51-201ENST00000605166 MARVELD3Q96A59 401 aa10.8□□□□□ -0.68
HMGB1P51-201ENST00000605166 SLC34A2O95436 690 aa10.77□□□□□ -0.69
HMGB1P51-201ENST00000605166 FOXK1P85037 733 aa10.77□□□□□ -0.69
HMGB1P51-201ENST00000605166 AK7Q96M32 723 aa10.77□□□□□ -0.69
HMGB1P51-201ENST00000605166 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
HMGB1P51-201ENST00000605166 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
HMGB1P51-201ENST00000605166 GPIHBP1Q8IV16 184 aa10.76□□□□□ -0.69
HMGB1P51-201ENST00000605166 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
HMGB1P51-201ENST00000605166 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
HMGB1P51-201ENST00000605166 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P51-201ENST00000605166 GPR153Q6NV75 609 aa10.74□□□□□ -0.69
HMGB1P51-201ENST00000605166 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
HMGB1P51-201ENST00000605166 PLPP6Q8IY26 295 aa10.74□□□□□ -0.69
HMGB1P51-201ENST00000605166 ERBB3P21860 1342 aa10.74□□□□□ -0.69
HMGB1P51-201ENST00000605166 FAM205CA6NFA0 338 aa10.73□□□□□ -0.69
HMGB1P51-201ENST00000605166 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
HMGB1P51-201ENST00000605166 TBC1D12O60347 775 aa10.72□□□□□ -0.69
HMGB1P51-201ENST00000605166 DSG2Q14126 1118 aa10.71□□□□□ -0.69
HMGB1P51-201ENST00000605166 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P51-201ENST00000605166 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
HMGB1P51-201ENST00000605166 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
HMGB1P51-201ENST00000605166 PDIA6Q15084 440 aa10.68□□□□□ -0.7
HMGB1P51-201ENST00000605166 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
HMGB1P51-201ENST00000605166 DPYSL4O14531 572 aa10.67□□□□□ -0.7
HMGB1P51-201ENST00000605166 PTCD2Q8WV60 388 aaKnown RBP10.67□□□□□ -0.7
HMGB1P51-201ENST00000605166 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
HMGB1P51-201ENST00000605166 GPBP1L1Q9HC44 474 aaPredicted RBP10.66□□□□□ -0.7
HMGB1P51-201ENST00000605166 TRIM66O15016 1216 aa10.64□□□□□ -0.71
HMGB1P51-201ENST00000605166 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
HMGB1P51-201ENST00000605166 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
HMGB1P51-201ENST00000605166 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P51-201ENST00000605166 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
HMGB1P51-201ENST00000605166 NUDT7P0C024 238 aa10.62□□□□□ -0.71
HMGB1P51-201ENST00000605166 PDE4DQ08499 809 aa10.62□□□□□ -0.71
HMGB1P51-201ENST00000605166 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGB1P51-201ENST00000605166 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
HMGB1P51-201ENST00000605166 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
HMGB1P51-201ENST00000605166 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
HMGB1P51-201ENST00000605166 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
HMGB1P51-201ENST00000605166 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
HMGB1P51-201ENST00000605166 GPR37O15354 613 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms