RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SPNS2Q8IVW8 549 aa11.52□□□□□ -0.57
LSM1P2-201ENST00000604911 MFRPQ9BY79 579 aa11.52□□□□□ -0.57
LSM1P2-201ENST00000604911 STK25O00506 426 aa11.5□□□□□ -0.57
LSM1P2-201ENST00000604911 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
LSM1P2-201ENST00000604911 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
LSM1P2-201ENST00000604911 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
LSM1P2-201ENST00000604911 MMRN1Q13201 1228 aa11.47□□□□□ -0.57
LSM1P2-201ENST00000604911 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
LSM1P2-201ENST00000604911 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
LSM1P2-201ENST00000604911 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
LSM1P2-201ENST00000604911 KIF3CO14782 793 aa11.4□□□□□ -0.58
LSM1P2-201ENST00000604911 ERBB3P21860 1342 aa11.39□□□□□ -0.59
LSM1P2-201ENST00000604911 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
LSM1P2-201ENST00000604911 C2orf72A6NCS6 295 aa11.34□□□□□ -0.59
LSM1P2-201ENST00000604911 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
LSM1P2-201ENST00000604911 PPP1R37O75864 691 aa11.31□□□□□ -0.6
LSM1P2-201ENST00000604911 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
LSM1P2-201ENST00000604911 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
LSM1P2-201ENST00000604911 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
LSM1P2-201ENST00000604911 SLC34A2O95436 690 aa11.25□□□□□ -0.61
LSM1P2-201ENST00000604911 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
LSM1P2-201ENST00000604911 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
LSM1P2-201ENST00000604911 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
LSM1P2-201ENST00000604911 PCDHGA4Q9Y5G9 962 aa11.2□□□□□ -0.62
LSM1P2-201ENST00000604911 NUDT7P0C024 238 aa11.18□□□□□ -0.62
LSM1P2-201ENST00000604911 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
LSM1P2-201ENST00000604911 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
LSM1P2-201ENST00000604911 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
LSM1P2-201ENST00000604911 FOXK1P85037 733 aa11.14□□□□□ -0.63
LSM1P2-201ENST00000604911 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
LSM1P2-201ENST00000604911 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
LSM1P2-201ENST00000604911 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
LSM1P2-201ENST00000604911 POTEEQ6S8J3 1075 aa11.11□□□□□ -0.63
LSM1P2-201ENST00000604911 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
LSM1P2-201ENST00000604911 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
LSM1P2-201ENST00000604911 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
LSM1P2-201ENST00000604911 PBX2P40425 430 aa11.09□□□□□ -0.63
LSM1P2-201ENST00000604911 PTGER2P43116 358 aa11.09□□□□□ -0.63
LSM1P2-201ENST00000604911 PLPP6Q8IY26 295 aa11.09□□□□□ -0.63
LSM1P2-201ENST00000604911 DSG2Q14126 1118 aa11.08□□□□□ -0.64
LSM1P2-201ENST00000604911 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
LSM1P2-201ENST00000604911 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
LSM1P2-201ENST00000604911 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
LSM1P2-201ENST00000604911 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
LSM1P2-201ENST00000604911 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
LSM1P2-201ENST00000604911 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
LSM1P2-201ENST00000604911 GTPBP6O43824 516 aaPredicted RBP10.97□□□□□ -0.65
LSM1P2-201ENST00000604911 OXER1Q8TDS5 423 aa10.97□□□□□ -0.65
LSM1P2-201ENST00000604911 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
LSM1P2-201ENST00000604911 TBC1D12O60347 775 aa10.96□□□□□ -0.65
LSM1P2-201ENST00000604911 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
LSM1P2-201ENST00000604911 ADGRD1Q6QNK2 874 aa10.93□□□□□ -0.66
LSM1P2-201ENST00000604911 MYT1Q01538 1121 aa10.91□□□□□ -0.66
LSM1P2-201ENST00000604911 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
LSM1P2-201ENST00000604911 DMRTA1Q5VZB9 504 aa10.91□□□□□ -0.66
LSM1P2-201ENST00000604911 TK2O00142 265 aa10.9□□□□□ -0.66
LSM1P2-201ENST00000604911 PDE4AP27815 886 aa10.9□□□□□ -0.66
LSM1P2-201ENST00000604911 PSEN2P49810 448 aa10.9□□□□□ -0.66
LSM1P2-201ENST00000604911 HRO43593 1189 aa10.89□□□□□ -0.67
LSM1P2-201ENST00000604911 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.67
LSM1P2-201ENST00000604911 MFSD10Q14728 455 aa10.85□□□□□ -0.67
LSM1P2-201ENST00000604911 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
LSM1P2-201ENST00000604911 FOSBP53539 338 aa10.82□□□□□ -0.68
LSM1P2-201ENST00000604911 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
LSM1P2-201ENST00000604911 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
LSM1P2-201ENST00000604911 LARP6Q9BRS8 491 aaKnown RBP10.82□□□□□ -0.68
LSM1P2-201ENST00000604911 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
LSM1P2-201ENST00000604911 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
LSM1P2-201ENST00000604911 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
LSM1P2-201ENST00000604911 HCSTQ9UBK5 93 aa10.8□□□□□ -0.68
LSM1P2-201ENST00000604911 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
LSM1P2-201ENST00000604911 EVI5O60447 810 aa10.78□□□□□ -0.68
LSM1P2-201ENST00000604911 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
LSM1P2-201ENST00000604911 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
LSM1P2-201ENST00000604911 JPH4Q96JJ6 628 aa10.77□□□□□ -0.69
LSM1P2-201ENST00000604911 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
LSM1P2-201ENST00000604911 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
LSM1P2-201ENST00000604911 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
LSM1P2-201ENST00000604911 TTBK1Q5TCY1 1321 aaPredicted RBP10.73□□□□□ -0.69
LSM1P2-201ENST00000604911 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
LSM1P2-201ENST00000604911 PTPREP23469 700 aa10.72□□□□□ -0.69
LSM1P2-201ENST00000604911 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
LSM1P2-201ENST00000604911 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
LSM1P2-201ENST00000604911 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
LSM1P2-201ENST00000604911 ZBED2Q9BTP6 218 aa10.71□□□□□ -0.69
LSM1P2-201ENST00000604911 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
LSM1P2-201ENST00000604911 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
LSM1P2-201ENST00000604911 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
LSM1P2-201ENST00000604911 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
LSM1P2-201ENST00000604911 STAC3Q96MF2 364 aa10.67□□□□□ -0.7
LSM1P2-201ENST00000604911 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
LSM1P2-201ENST00000604911 PHF14O94880 888 aa10.62□□□□□ -0.71
LSM1P2-201ENST00000604911 PPP1R3GB7ZBB8 358 aa10.61□□□□□ -0.71
LSM1P2-201ENST00000604911 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
LSM1P2-201ENST00000604911 FBXW7Q969H0 707 aa10.6□□□□□ -0.71
LSM1P2-201ENST00000604911 COL9A1P20849 921 aa10.59□□□□□ -0.71
LSM1P2-201ENST00000604911 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
LSM1P2-201ENST00000604911 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
LSM1P2-201ENST00000604911 DPYSL4O14531 572 aa10.58□□□□□ -0.72
LSM1P2-201ENST00000604911 PTPN5P54829 565 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms