RNA–Protein interactions for RNA: ENST00000593817.1

LRMDA-210, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-210ENST00000593817 ARID4BQ4LE39 1312 aaPredicted RBP8.53□□□□□ -1.04
LRMDA-210ENST00000593817 PREX1Q8TCU6 1659 aa8.52□□□□□ -1.05
LRMDA-210ENST00000593817 CDC42BPAQ5VT25 1732 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 HSPA2P54652 639 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 POGZQ7Z3K3 1410 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
LRMDA-210ENST00000593817 ARHGEF12Q9NZN5 1544 aa8.5□□□□□ -1.05
LRMDA-210ENST00000593817 PLCH2O75038 1416 aa8.5□□□□□ -1.05
LRMDA-210ENST00000593817 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
LRMDA-210ENST00000593817 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
LRMDA-210ENST00000593817 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
LRMDA-210ENST00000593817 C3P01024 1663 aa8.49□□□□□ -1.05
LRMDA-210ENST00000593817 ITSN2Q9NZM3 1697 aa8.49□□□□□ -1.05
LRMDA-210ENST00000593817 KDM5CP41229 1560 aa8.49□□□□□ -1.05
LRMDA-210ENST00000593817 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
LRMDA-210ENST00000593817 MLECQ14165 292 aa8.49□□□□□ -1.05
LRMDA-210ENST00000593817 PREX2Q70Z35 1606 aa8.48□□□□□ -1.05
LRMDA-210ENST00000593817 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
LRMDA-210ENST00000593817 KIDINS220Q9ULH0 1771 aa8.48□□□□□ -1.05
LRMDA-210ENST00000593817 ATP10AO60312 1499 aa8.46□□□□□ -1.05
LRMDA-210ENST00000593817 ARHGAP5Q13017 1502 aa8.46□□□□□ -1.05
LRMDA-210ENST00000593817 C9orf84Q5VXU9 1444 aa8.46□□□□□ -1.06
LRMDA-210ENST00000593817 CEBPAP49715 358 aaPredicted RBP8.45□□□□□ -1.06
LRMDA-210ENST00000593817 TROQ12816 1431 aaPredicted RBP8.45□□□□□ -1.06
LRMDA-210ENST00000593817 FMN1Q68DA7 1419 aa8.45□□□□□ -1.06
LRMDA-210ENST00000593817 ABCC1P33527 1531 aa8.44□□□□□ -1.06
LRMDA-210ENST00000593817 AFAP1Q8N556 730 aa8.44□□□□□ -1.06
LRMDA-210ENST00000593817 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
LRMDA-210ENST00000593817 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
LRMDA-210ENST00000593817 SUPT6HQ7KZ85 1726 aaKnown RBP8.43□□□□□ -1.06
LRMDA-210ENST00000593817 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
LRMDA-210ENST00000593817 TRAPPC8Q9Y2L5 1435 aa8.43□□□□□ -1.06
LRMDA-210ENST00000593817 ZNF518AQ6AHZ1 1483 aa8.43□□□□□ -1.06
LRMDA-210ENST00000593817 SAMD9LQ8IVG5 1584 aa8.42□□□□□ -1.06
LRMDA-210ENST00000593817 EFCAB2Q5VUJ9 269 aa8.41□□□□□ -1.06
LRMDA-210ENST00000593817 CLTCQ00610 1675 aaKnown RBP8.4□□□□□ -1.07
LRMDA-210ENST00000593817 MLH3Q9UHC1 1453 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 CASKIN1Q8WXD9 1431 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 CERKQ8TCT0 537 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 MROH2AA6NES4 1674 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 AGLP35573 1532 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 SYCP2Q9BX26 1530 aa8.39□□□□□ -1.07
LRMDA-210ENST00000593817 CLIP1P30622 1438 aa8.37□□□□□ -1.07
LRMDA-210ENST00000593817 LTBP4Q8N2S1 1624 aa8.37□□□□□ -1.07
LRMDA-210ENST00000593817 INO80Q9ULG1 1556 aaPredicted RBP8.37□□□□□ -1.07
LRMDA-210ENST00000593817 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
LRMDA-210ENST00000593817 FYCO1Q9BQS8 1478 aa8.36□□□□□ -1.07
LRMDA-210ENST00000593817 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
LRMDA-210ENST00000593817 ADGBQ8N7X0 1667 aa8.36□□□□□ -1.07
LRMDA-210ENST00000593817 UHRF1BP1Q6BDS2 1440 aa8.36□□□□□ -1.07
LRMDA-210ENST00000593817 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
LRMDA-210ENST00000593817 PLXNC1O60486 1568 aa8.35□□□□□ -1.07
LRMDA-210ENST00000593817 GPATCH8Q9UKJ3 1502 aaKnown RBP8.35□□□□□ -1.07
LRMDA-210ENST00000593817 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
LRMDA-210ENST00000593817 ATP7AQ04656 1500 aa8.34□□□□□ -1.07
LRMDA-210ENST00000593817 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
LRMDA-210ENST00000593817 TIAM1Q13009 1591 aa8.34□□□□□ -1.07
LRMDA-210ENST00000593817 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
LRMDA-210ENST00000593817 PTPRTO14522 1441 aa8.32□□□□□ -1.08
LRMDA-210ENST00000593817 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
LRMDA-210ENST00000593817 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
LRMDA-210ENST00000593817 CFAP65Q6ZU64 1925 aaKnown RBP8.32□□□□□ -1.08
LRMDA-210ENST00000593817 HNRNPMP52272 730 aaKnown RBP eCLIP8.31□□□□□ -1.087e-7■■■■□ 19.6
LRMDA-210ENST00000593817 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
LRMDA-210ENST00000593817 POLR1AO95602 1720 aaPredicted RBP8.31□□□□□ -1.08
LRMDA-210ENST00000593817 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
LRMDA-210ENST00000593817 CEP170BQ9Y4F5 1589 aaPredicted RBP8.3□□□□□ -1.08
LRMDA-210ENST00000593817 ZMYM3Q14202 1370 aa8.29□□□□□ -1.08
LRMDA-210ENST00000593817 A2MP01023 1474 aa8.29□□□□□ -1.08
LRMDA-210ENST00000593817 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
LRMDA-210ENST00000593817 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
LRMDA-210ENST00000593817 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
LRMDA-210ENST00000593817 MBD5Q9P267 1494 aa8.28□□□□□ -1.08
LRMDA-210ENST00000593817 DNMT1P26358 1616 aaKnown RBP8.28□□□□□ -1.08
LRMDA-210ENST00000593817 NPATQ14207 1427 aa8.28□□□□□ -1.08
LRMDA-210ENST00000593817 KIAA1107Q9UPP5 1409 aa8.28□□□□□ -1.08
LRMDA-210ENST00000593817 SPAG9O60271 1321 aaKnown RBP8.28□□□□□ -1.08
LRMDA-210ENST00000593817 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
LRMDA-210ENST00000593817 STRCP1A6NGW2 1772 aa8.27□□□□□ -1.09
LRMDA-210ENST00000593817 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
LRMDA-210ENST00000593817 TCOF1Q13428 1488 aaKnown RBP8.26□□□□□ -1.09
LRMDA-210ENST00000593817 EHBP1L1Q8N3D4 1523 aa8.26□□□□□ -1.09
LRMDA-210ENST00000593817 DMRT2Q9Y5R5 561 aa8.26□□□□□ -1.09
LRMDA-210ENST00000593817 ZNF335Q9H4Z2 1342 aaPredicted RBP8.26□□□□□ -1.09
LRMDA-210ENST00000593817 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
LRMDA-210ENST00000593817 DISP3Q9P2K9 1392 aa8.25□□□□□ -1.09
LRMDA-210ENST00000593817 IQSEC2Q5JU85 1478 aa8.25□□□□□ -1.09
LRMDA-210ENST00000593817 PLEKHH2Q8IVE3 1493 aa8.25□□□□□ -1.09
LRMDA-210ENST00000593817 CEP152O94986 1710 aa8.24□□□□□ -1.09
LRMDA-210ENST00000593817 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
LRMDA-210ENST00000593817 CFDP1Q9UEE9 299 aaPredicted RBP8.24□□□□□ -1.09
LRMDA-210ENST00000593817 PLA2R1Q13018 1463 aa8.24□□□□□ -1.09
LRMDA-210ENST00000593817 MTUS2Q5JR59 1369 aa8.23□□□□□ -1.09
LRMDA-210ENST00000593817 ALKQ9UM73 1620 aa8.23□□□□□ -1.09
LRMDA-210ENST00000593817 GGT6Q6P531 493 aa8.23□□□□□ -1.09
LRMDA-210ENST00000593817 CAMSAP2Q08AD1 1489 aa8.23□□□□□ -1.09
LRMDA-210ENST00000593817 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
LRMDA-210ENST00000593817 A2ML1A8K2U0 1454 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms