RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
LINC01539-206ENST00000593282 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
LINC01539-206ENST00000593282 ERBB3P21860 1342 aa9.94□□□□□ -0.82
LINC01539-206ENST00000593282 TMEM92Q6UXU6 159 aa9.94□□□□□ -0.82
LINC01539-206ENST00000593282 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
LINC01539-206ENST00000593282 MFRPQ9BY79 579 aa9.93□□□□□ -0.82
LINC01539-206ENST00000593282 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
LINC01539-206ENST00000593282 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
LINC01539-206ENST00000593282 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
LINC01539-206ENST00000593282 MMRN1Q13201 1228 aa9.9□□□□□ -0.82
LINC01539-206ENST00000593282 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
LINC01539-206ENST00000593282 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
LINC01539-206ENST00000593282 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
LINC01539-206ENST00000593282 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
LINC01539-206ENST00000593282 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
LINC01539-206ENST00000593282 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
LINC01539-206ENST00000593282 C2orf72A6NCS6 295 aa9.81□□□□□ -0.84
LINC01539-206ENST00000593282 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
LINC01539-206ENST00000593282 KIF3CO14782 793 aa9.76□□□□□ -0.85
LINC01539-206ENST00000593282 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
LINC01539-206ENST00000593282 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
LINC01539-206ENST00000593282 ZNF687Q8N1G0 1237 aa9.76□□□□□ -0.85
LINC01539-206ENST00000593282 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC01539-206ENST00000593282 PPP1R37O75864 691 aa9.75□□□□□ -0.85
LINC01539-206ENST00000593282 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
LINC01539-206ENST00000593282 NUDT7P0C024 238 aa9.72□□□□□ -0.85
LINC01539-206ENST00000593282 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
LINC01539-206ENST00000593282 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
LINC01539-206ENST00000593282 SLC34A2O95436 690 aa9.67□□□□□ -0.86
LINC01539-206ENST00000593282 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
LINC01539-206ENST00000593282 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
LINC01539-206ENST00000593282 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
LINC01539-206ENST00000593282 LHX6Q9UPM6 363 aa9.65□□□□□ -0.86
LINC01539-206ENST00000593282 PTGER2P43116 358 aa9.64□□□□□ -0.87
LINC01539-206ENST00000593282 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
LINC01539-206ENST00000593282 PLPP6Q8IY26 295 aa9.63□□□□□ -0.87
LINC01539-206ENST00000593282 PBX2P40425 430 aa9.61□□□□□ -0.87
LINC01539-206ENST00000593282 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC01539-206ENST00000593282 FOXK1P85037 733 aa9.61□□□□□ -0.87
LINC01539-206ENST00000593282 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
LINC01539-206ENST00000593282 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
LINC01539-206ENST00000593282 TBC1D12O60347 775 aa9.59□□□□□ -0.87
LINC01539-206ENST00000593282 DSG2Q14126 1118 aa9.58□□□□□ -0.88
LINC01539-206ENST00000593282 NKX1-1Q15270 411 aaPredicted RBP9.58□□□□□ -0.88
LINC01539-206ENST00000593282 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
LINC01539-206ENST00000593282 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
LINC01539-206ENST00000593282 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
LINC01539-206ENST00000593282 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
LINC01539-206ENST00000593282 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC01539-206ENST00000593282 ARHGAP33O14559 1287 aa9.52□□□□□ -0.89
LINC01539-206ENST00000593282 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
LINC01539-206ENST00000593282 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
LINC01539-206ENST00000593282 PPP1R15BQ5SWA1 713 aa9.5□□□□□ -0.89
LINC01539-206ENST00000593282 PDE4AP27815 886 aa9.49□□□□□ -0.89
LINC01539-206ENST00000593282 CRISPLD2Q9H0B8 497 aa9.48□□□□□ -0.89
LINC01539-206ENST00000593282 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
LINC01539-206ENST00000593282 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
LINC01539-206ENST00000593282 PSEN2P49810 448 aa9.46□□□□□ -0.9
LINC01539-206ENST00000593282 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
LINC01539-206ENST00000593282 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
LINC01539-206ENST00000593282 OXER1Q8TDS5 423 aa9.45□□□□□ -0.9
LINC01539-206ENST00000593282 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
LINC01539-206ENST00000593282 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
LINC01539-206ENST00000593282 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
LINC01539-206ENST00000593282 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
LINC01539-206ENST00000593282 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
LINC01539-206ENST00000593282 TK2O00142 265 aa9.42□□□□□ -0.9
LINC01539-206ENST00000593282 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
LINC01539-206ENST00000593282 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
LINC01539-206ENST00000593282 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
LINC01539-206ENST00000593282 EVI5O60447 810 aa9.37□□□□□ -0.91
LINC01539-206ENST00000593282 HRO43593 1189 aa9.35□□□□□ -0.91
LINC01539-206ENST00000593282 PTPREP23469 700 aa9.35□□□□□ -0.91
LINC01539-206ENST00000593282 KCTD12Q96CX2 325 aaKnown RBP9.35□□□□□ -0.91
LINC01539-206ENST00000593282 FOSBP53539 338 aa9.34□□□□□ -0.91
LINC01539-206ENST00000593282 BCL2L12Q9HB09 334 aa9.34□□□□□ -0.91
LINC01539-206ENST00000593282 MFSD10Q14728 455 aa9.33□□□□□ -0.92
LINC01539-206ENST00000593282 JPH4Q96JJ6 628 aa9.33□□□□□ -0.92
LINC01539-206ENST00000593282 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
LINC01539-206ENST00000593282 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
LINC01539-206ENST00000593282 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
LINC01539-206ENST00000593282 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
LINC01539-206ENST00000593282 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
LINC01539-206ENST00000593282 CADPS2Q86UW7 1296 aa9.29□□□□□ -0.92
LINC01539-206ENST00000593282 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
LINC01539-206ENST00000593282 ADAM33Q9BZ11 813 aa9.27□□□□□ -0.93
LINC01539-206ENST00000593282 PTPN5P54829 565 aa9.26□□□□□ -0.93
LINC01539-206ENST00000593282 BBXQ8WY36 941 aaPredicted RBP9.26□□□□□ -0.93
LINC01539-206ENST00000593282 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
LINC01539-206ENST00000593282 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
LINC01539-206ENST00000593282 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
LINC01539-206ENST00000593282 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
LINC01539-206ENST00000593282 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
LINC01539-206ENST00000593282 TYW1BQ6NUM6 668 aa9.22□□□□□ -0.93
LINC01539-206ENST00000593282 WNT2BQ93097 391 aa9.22□□□□□ -0.93
LINC01539-206ENST00000593282 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
LINC01539-206ENST00000593282 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
LINC01539-206ENST00000593282 PHF14O94880 888 aa9.21□□□□□ -0.94
LINC01539-206ENST00000593282 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
LINC01539-206ENST00000593282 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms