RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
SF3A2-206ENST00000592314 HSPA2P54652 639 aa24.87■■□□□ 1.57
SF3A2-206ENST00000592314 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
SF3A2-206ENST00000592314 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
SF3A2-206ENST00000592314 ARHGEF12Q9NZN5 1544 aa24.83■■□□□ 1.57
SF3A2-206ENST00000592314 PLPPR3Q6T4P5 718 aa24.83■■□□□ 1.57
SF3A2-206ENST00000592314 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
SF3A2-206ENST00000592314 MLECQ14165 292 aa24.78■■□□□ 1.56
SF3A2-206ENST00000592314 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
SF3A2-206ENST00000592314 FMN1Q68DA7 1419 aa24.77■■□□□ 1.56
SF3A2-206ENST00000592314 ATP10AO60312 1499 aa24.77■■□□□ 1.56
SF3A2-206ENST00000592314 KDM5CP41229 1560 aa24.76■■□□□ 1.55
SF3A2-206ENST00000592314 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
SF3A2-206ENST00000592314 CDC42BPBQ9Y5S2 1711 aa24.73■■□□□ 1.55
SF3A2-206ENST00000592314 DIP2CQ9Y2E4 1556 aa24.71■■□□□ 1.55
SF3A2-206ENST00000592314 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
SF3A2-206ENST00000592314 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
SF3A2-206ENST00000592314 ZNF518AQ6AHZ1 1483 aa24.7■■□□□ 1.55
SF3A2-206ENST00000592314 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
SF3A2-206ENST00000592314 ABCA6Q8N139 1617 aa24.69■■□□□ 1.54
SF3A2-206ENST00000592314 STRCQ7RTU9 1775 aa24.68■■□□□ 1.54
SF3A2-206ENST00000592314 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
SF3A2-206ENST00000592314 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
SF3A2-206ENST00000592314 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
SF3A2-206ENST00000592314 CEBPAP49715 358 aaPredicted RBP24.65■■□□□ 1.54
SF3A2-206ENST00000592314 REREQ9P2R6 1566 aa24.64■■□□□ 1.54
SF3A2-206ENST00000592314 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
SF3A2-206ENST00000592314 AFAP1Q8N556 730 aa24.63■■□□□ 1.53
SF3A2-206ENST00000592314 ABCC1P33527 1531 aa24.62■■□□□ 1.53
SF3A2-206ENST00000592314 C3P01024 1663 aa24.61■■□□□ 1.53
SF3A2-206ENST00000592314 CERKQ8TCT0 537 aa24.6■■□□□ 1.53
SF3A2-206ENST00000592314 CLIP1P30622 1438 aa24.6■■□□□ 1.53
SF3A2-206ENST00000592314 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
SF3A2-206ENST00000592314 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
SF3A2-206ENST00000592314 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
SF3A2-206ENST00000592314 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
SF3A2-206ENST00000592314 MLH3Q9UHC1 1453 aa24.57■■□□□ 1.52
SF3A2-206ENST00000592314 SETD1BQ9UPS6 1966 aaKnown RBP24.55■■□□□ 1.52
SF3A2-206ENST00000592314 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
SF3A2-206ENST00000592314 AGLP35573 1532 aa24.53■■□□□ 1.52
SF3A2-206ENST00000592314 UHRF1BP1Q6BDS2 1440 aa24.52■■□□□ 1.52
SF3A2-206ENST00000592314 CASKIN1Q8WXD9 1431 aa24.52■■□□□ 1.52
SF3A2-206ENST00000592314 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
SF3A2-206ENST00000592314 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
SF3A2-206ENST00000592314 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.5
SF3A2-206ENST00000592314 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
SF3A2-206ENST00000592314 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
SF3A2-206ENST00000592314 MROH2AA6NES4 1674 aa24.4■■□□□ 1.5
SF3A2-206ENST00000592314 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.5
SF3A2-206ENST00000592314 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
SF3A2-206ENST00000592314 PTPRTO14522 1441 aa24.38■■□□□ 1.49
SF3A2-206ENST00000592314 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
SF3A2-206ENST00000592314 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
SF3A2-206ENST00000592314 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
SF3A2-206ENST00000592314 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
SF3A2-206ENST00000592314 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
SF3A2-206ENST00000592314 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
SF3A2-206ENST00000592314 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
SF3A2-206ENST00000592314 CLTCQ00610 1675 aaKnown RBP24.33■■□□□ 1.49
SF3A2-206ENST00000592314 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
SF3A2-206ENST00000592314 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
SF3A2-206ENST00000592314 MYO3AQ8NEV4 1616 aa24.29■■□□□ 1.48
SF3A2-206ENST00000592314 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
SF3A2-206ENST00000592314 NPATQ14207 1427 aa24.28■■□□□ 1.48
SF3A2-206ENST00000592314 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
SF3A2-206ENST00000592314 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.489e-7■■□□□ 12.9
SF3A2-206ENST00000592314 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
SF3A2-206ENST00000592314 SPAG9O60271 1321 aaKnown RBP24.26■■□□□ 1.47
SF3A2-206ENST00000592314 ZMYM3Q14202 1370 aa24.24■■□□□ 1.47
SF3A2-206ENST00000592314 DISP3Q9P2K9 1392 aa24.24■■□□□ 1.47
SF3A2-206ENST00000592314 KIAA1107Q9UPP5 1409 aa24.24■■□□□ 1.47
SF3A2-206ENST00000592314 A2MP01023 1474 aa24.23■■□□□ 1.47
SF3A2-206ENST00000592314 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
SF3A2-206ENST00000592314 SPATA31D1Q6ZQQ2 1576 aa24.23■■□□□ 1.47
SF3A2-206ENST00000592314 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
SF3A2-206ENST00000592314 CEP170BQ9Y4F5 1589 aaPredicted RBP24.21■■□□□ 1.47
SF3A2-206ENST00000592314 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
SF3A2-206ENST00000592314 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.47
SF3A2-206ENST00000592314 PTPRKQ15262 1439 aa24.19■■□□□ 1.46
SF3A2-206ENST00000592314 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
SF3A2-206ENST00000592314 NCKAP5LQ9HCH0 1330 aa24.16■■□□□ 1.46
SF3A2-206ENST00000592314 TCOF1Q13428 1488 aaKnown RBP24.16■■□□□ 1.46
SF3A2-206ENST00000592314 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
SF3A2-206ENST00000592314 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
SF3A2-206ENST00000592314 MBD5Q9P267 1494 aa24.15■■□□□ 1.46
SF3A2-206ENST00000592314 ZNF644Q9H582 1327 aaPredicted RBP24.14■■□□□ 1.46
SF3A2-206ENST00000592314 ZNF335Q9H4Z2 1342 aaPredicted RBP24.13■■□□□ 1.45
SF3A2-206ENST00000592314 EHBP1L1Q8N3D4 1523 aa24.13■■□□□ 1.45
SF3A2-206ENST00000592314 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
SF3A2-206ENST00000592314 DNMT1P26358 1616 aaKnown RBP24.1■■□□□ 1.45
SF3A2-206ENST00000592314 GGT6Q6P531 493 aa24.09■■□□□ 1.45
SF3A2-206ENST00000592314 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
SF3A2-206ENST00000592314 NEURL4Q96JN8 1562 aa24.05■■□□□ 1.44
SF3A2-206ENST00000592314 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
SF3A2-206ENST00000592314 SOCS7O14512 581 aa24.05■■□□□ 1.44
SF3A2-206ENST00000592314 A2ML1A8K2U0 1454 aa24.05■■□□□ 1.44
SF3A2-206ENST00000592314 RTEL1-TNFRSF6BF6WH68 1400 aa24.03■■□□□ 1.44
SF3A2-206ENST00000592314 PKD2Q13563 968 aa24.01■■□□□ 1.43
SF3A2-206ENST00000592314 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
SF3A2-206ENST00000592314 DHX29Q7Z478 1369 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms