RNA–Protein interactions for RNA: ENST00000592056.5

CLASRP-215, Transcript of CLK4 associating serine/arginine rich protein, human

TSL 2

Gene CLASRP, Length 582 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASRP-215	ENST00000592056	MAGI2	Q86UL8	1455 aa		32.58	■■■□□ 2.81
CLASRP-215	ENST00000592056	SCAPER	Q9BY12	1400 aa		32.55	■■■□□ 2.8
CLASRP-215	ENST00000592056	EHMT2	Q96KQ7	1210 aa		32.55	■■■□□ 2.8
CLASRP-215	ENST00000592056	FMN1	Q68DA7	1419 aa		32.54	■■■□□ 2.8
CLASRP-215	ENST00000592056	ARHGEF12	Q9NZN5	1544 aa		32.48	■■■□□ 2.79
CLASRP-215	ENST00000592056	CDC42BPB	Q9Y5S2	1711 aa		32.48	■■■□□ 2.79
CLASRP-215	ENST00000592056	KDM5C	P41229	1560 aa		32.47	■■■□□ 2.79
CLASRP-215	ENST00000592056	CHIC1	Q5VXU3	224 aa		32.45	■■■□□ 2.79
CLASRP-215	ENST00000592056	TRO	Q12816	1431 aa	Predicted RBP	32.44	■■■□□ 2.78
CLASRP-215	ENST00000592056	UBTF	P17480	764 aa	Known RBP	32.44	■■■□□ 2.78
CLASRP-215	ENST00000592056	FBXO41	Q8TF61	875 aa		32.42	■■■□□ 2.78
CLASRP-215	ENST00000592056	ATP10A	O60312	1499 aa		32.42	■■■□□ 2.78
CLASRP-215	ENST00000592056	HSPA2	P54652	639 aa		32.4	■■■□□ 2.78
CLASRP-215	ENST00000592056	C9orf84	Q5VXU9	1444 aa		32.4	■■■□□ 2.78
CLASRP-215	ENST00000592056	PREX2	Q70Z35	1606 aa		32.38	■■■□□ 2.77
CLASRP-215	ENST00000592056	DIP2C	Q9Y2E4	1556 aa		32.38	■■■□□ 2.77
CLASRP-215	ENST00000592056	ARHGAP5	Q13017	1502 aa		32.38	■■■□□ 2.77
CLASRP-215	ENST00000592056	ABCA6	Q8N139	1617 aa		32.37	■■■□□ 2.77
CLASRP-215	ENST00000592056	MLEC	Q14165	292 aa		32.36	■■■□□ 2.77
CLASRP-215	ENST00000592056	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.36	■■■□□ 2.77
CLASRP-215	ENST00000592056	ZNF518A	Q6AHZ1	1483 aa		32.35	■■■□□ 2.77
CLASRP-215	ENST00000592056	PREX1	Q8TCU6	1659 aa		32.34	■■■□□ 2.77
CLASRP-215	ENST00000592056	EFCAB2	Q5VUJ9	269 aa		32.34	■■■□□ 2.77
CLASRP-215	ENST00000592056	PLPPR3	Q6T4P5	718 aa		32.34	■■■□□ 2.77
CLASRP-215	ENST00000592056	ITSN2	Q9NZM3	1697 aa		32.33	■■■□□ 2.77
CLASRP-215	ENST00000592056	CDC42BPA	Q5VT25	1732 aa		32.31	■■■□□ 2.76
CLASRP-215	ENST00000592056	RERE	Q9P2R6	1566 aa		32.31	■■■□□ 2.76
CLASRP-215	ENST00000592056	ABCC1	P33527	1531 aa		32.31	■■■□□ 2.76
CLASRP-215	ENST00000592056	AFAP1	Q8N556	730 aa		32.27	■■■□□ 2.76
CLASRP-215	ENST00000592056	CLIP1	P30622	1438 aa		32.26	■■■□□ 2.76
CLASRP-215	ENST00000592056	CASKIN1	Q8WXD9	1431 aa		32.26	■■■□□ 2.75
CLASRP-215	ENST00000592056	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.25	■■■□□ 2.75
CLASRP-215	ENST00000592056	STRC	Q7RTU9	1775 aa		32.24	■■■□□ 2.75
CLASRP-215	ENST00000592056	KIDINS220	Q9ULH0	1771 aa		32.23	■■■□□ 2.75
CLASRP-215	ENST00000592056	TRAPPC8	Q9Y2L5	1435 aa		32.23	■■■□□ 2.75
CLASRP-215	ENST00000592056	MLH3	Q9UHC1	1453 aa		32.22	■■■□□ 2.75
CLASRP-215	ENST00000592056	C3	P01024	1663 aa		32.21	■■■□□ 2.75
CLASRP-215	ENST00000592056	CCDC18	Q5T9S5	1454 aa		32.21	■■■□□ 2.75
CLASRP-215	ENST00000592056	CEBPA	P49715	358 aa	Predicted RBP	32.19	■■■□□ 2.74
CLASRP-215	ENST00000592056	AGL	P35573	1532 aa		32.15	■■■□□ 2.74
CLASRP-215	ENST00000592056	SAMD9L	Q8IVG5	1584 aa		32.14	■■■□□ 2.74
CLASRP-215	ENST00000592056	SETD1B	Q9UPS6	1966 aa	Known RBP	32.14	■■■□□ 2.74
CLASRP-215	ENST00000592056	FYCO1	Q9BQS8	1478 aa		32.13	■■■□□ 2.73
CLASRP-215	ENST00000592056	SYCP2	Q9BX26	1530 aa		32.05	■■■□□ 2.72
CLASRP-215	ENST00000592056	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.02	■■■□□ 2.72
CLASRP-215	ENST00000592056	CERK	Q8TCT0	537 aa		32.01	■■■□□ 2.71
CLASRP-215	ENST00000592056	UHRF1BP1	Q6BDS2	1440 aa		32	■■■□□ 2.71
CLASRP-215	ENST00000592056	INO80	Q9ULG1	1556 aa	Predicted RBP	31.98	■■■□□ 2.71
CLASRP-215	ENST00000592056	MROH2A	A6NES4	1674 aa		31.97	■■■□□ 2.71
CLASRP-215	ENST00000592056	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.96	■■■□□ 2.71
CLASRP-215	ENST00000592056	PLXNC1	O60486	1568 aa		31.95	■■■□□ 2.71
CLASRP-215	ENST00000592056	MYT1L	Q9UL68	1186 aa		31.95	■■■□□ 2.71
CLASRP-215	ENST00000592056	ATP7A	Q04656	1500 aa		31.91	■■■□□ 2.7
CLASRP-215	ENST00000592056	CLTC	Q00610	1675 aa	Known RBP	31.87	■■■□□ 2.69
CLASRP-215	ENST00000592056	TIAM1	Q13009	1591 aa		31.85	■■■□□ 2.69
CLASRP-215	ENST00000592056	CNTLN	Q9NXG0	1405 aa		31.85	■■■□□ 2.69
CLASRP-215	ENST00000592056	LTBP4	Q8N2S1	1624 aa		31.84	■■■□□ 2.69
CLASRP-215	ENST00000592056	PTPRT	O14522	1441 aa		31.83	■■■□□ 2.69
CLASRP-215	ENST00000592056	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.83	■■■□□ 2.69
CLASRP-215	ENST00000592056	NCOA1	Q15788	1441 aa		31.83	■■■□□ 2.69
CLASRP-215	ENST00000592056	KIAA1107	Q9UPP5	1409 aa		31.83	■■■□□ 2.69
CLASRP-215	ENST00000592056	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.82	■■■□□ 2.68	1e-6	■■■■■ 32.8
CLASRP-215	ENST00000592056	ZNF142	P52746	1687 aa	Predicted RBP	31.8	■■■□□ 2.68
CLASRP-215	ENST00000592056	MYO3A	Q8NEV4	1616 aa		31.79	■■■□□ 2.68
CLASRP-215	ENST00000592056	SPAG9	O60271	1321 aa	Known RBP	31.78	■■■□□ 2.68
CLASRP-215	ENST00000592056	ADGB	Q8N7X0	1667 aa		31.78	■■■□□ 2.68
CLASRP-215	ENST00000592056	NPAT	Q14207	1427 aa		31.77	■■■□□ 2.68
CLASRP-215	ENST00000592056	CAMSAP1	Q5T5Y3	1602 aa		31.77	■■■□□ 2.68
CLASRP-215	ENST00000592056	PLEKHH2	Q8IVE3	1493 aa		31.77	■■■□□ 2.68
CLASRP-215	ENST00000592056	A2M	P01023	1474 aa		31.76	■■■□□ 2.67
CLASRP-215	ENST00000592056	DMRT2	Q9Y5R5	561 aa		31.74	■■■□□ 2.67
CLASRP-215	ENST00000592056	EHBP1L1	Q8N3D4	1523 aa		31.74	■■■□□ 2.67
CLASRP-215	ENST00000592056	MBD5	Q9P267	1494 aa		31.73	■■■□□ 2.67
CLASRP-215	ENST00000592056	CCNB3	Q8WWL7	1395 aa		31.73	■■■□□ 2.67
CLASRP-215	ENST00000592056	ZMYM3	Q14202	1370 aa		31.72	■■■□□ 2.67
CLASRP-215	ENST00000592056	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.7	■■■□□ 2.67
CLASRP-215	ENST00000592056	ZNF644	Q9H582	1327 aa	Predicted RBP	31.7	■■■□□ 2.66
CLASRP-215	ENST00000592056	ESF1	Q9H501	851 aa	Known RBP	31.69	■■■□□ 2.66
CLASRP-215	ENST00000592056	MTUS2	Q5JR59	1369 aa		31.68	■■■□□ 2.66
CLASRP-215	ENST00000592056	PTPRK	Q15262	1439 aa		31.68	■■■□□ 2.66
CLASRP-215	ENST00000592056	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.67	■■■□□ 2.66
CLASRP-215	ENST00000592056	CEP162	Q5TB80	1403 aa		31.63	■■■□□ 2.65
CLASRP-215	ENST00000592056	IQSEC2	Q5JU85	1478 aa		31.59	■■■□□ 2.65
CLASRP-215	ENST00000592056	TCOF1	Q13428	1488 aa	Known RBP	31.59	■■■□□ 2.65
CLASRP-215	ENST00000592056	PLA2R1	Q13018	1463 aa		31.58	■■■□□ 2.65
CLASRP-215	ENST00000592056	NCKAP5L	Q9HCH0	1330 aa		31.55	■■■□□ 2.64
CLASRP-215	ENST00000592056	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.55	■■■□□ 2.64
CLASRP-215	ENST00000592056	DNMT1	P26358	1616 aa	Known RBP	31.53	■■■□□ 2.64
CLASRP-215	ENST00000592056	NCOA2	Q15596	1464 aa		31.53	■■■□□ 2.64
CLASRP-215	ENST00000592056	GGT6	Q6P531	493 aa		31.53	■■■□□ 2.64
CLASRP-215	ENST00000592056	CAMSAP2	Q08AD1	1489 aa		31.52	■■■□□ 2.64
CLASRP-215	ENST00000592056	CCDC141	Q6ZP82	1450 aa		31.49	■■■□□ 2.63
CLASRP-215	ENST00000592056	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.49	■■■□□ 2.63
CLASRP-215	ENST00000592056	DHX29	Q7Z478	1369 aa	Known RBP	31.48	■■■□□ 2.63
CLASRP-215	ENST00000592056	POLR1A	O95602	1720 aa	Predicted RBP	31.48	■■■□□ 2.63
CLASRP-215	ENST00000592056	SPATA31D1	Q6ZQQ2	1576 aa		31.47	■■■□□ 2.63
CLASRP-215	ENST00000592056	NEURL4	Q96JN8	1562 aa		31.47	■■■□□ 2.63
CLASRP-215	ENST00000592056	A2ML1	A8K2U0	1454 aa		31.46	■■■□□ 2.63
CLASRP-215	ENST00000592056	ILDR2	Q71H61	639 aa		31.46	■■■□□ 2.63
CLASRP-215	ENST00000592056	ARHGEF5	Q12774	1597 aa		31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms